RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 RIOX1Q9H6W3 641 aa12.65□□□□□ -0.38
LINC00958-201ENST00000504230 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
LINC00958-201ENST00000504230 PPP1R9AQ9ULJ8 1098 aa12.65□□□□□ -0.38
LINC00958-201ENST00000504230 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.38
LINC00958-201ENST00000504230 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
LINC00958-201ENST00000504230 WDR33Q9C0J8 1336 aaKnown RBP12.65□□□□□ -0.38
LINC00958-201ENST00000504230 PDHXO00330 501 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 MAP2K2P36507 400 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 HTRA3P83110 453 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 SSRP1Q08945 709 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 VAT1LQ9HCJ6 419 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 FBXO28Q9NVF7 368 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 AOC2O75106 756 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 ZBED4O75132 1171 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 TM4SF4P48230 202 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 HMGN5P82970 282 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 ST3GAL1Q11201 340 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 NBPF11Q86T75 865 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 PHKBQ93100 1093 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 PTPN18Q99952 460 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 JMJD4Q9H9V9 463 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 SEC63Q9UGP8 760 aaKnown RBP12.64□□□□□ -0.39
LINC00958-201ENST00000504230 CNTNAP5Q8WYK1 1306 aa12.64□□□□□ -0.39
LINC00958-201ENST00000504230 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 CYTH3O43739 400 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 FMNL1O95466 1100 aaPredicted RBP12.63□□□□□ -0.39
LINC00958-201ENST00000504230 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 ALDH1A1P00352 501 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 VEGFBP49765 207 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 HERVK_113P62684 666 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 FUT2Q10981 343 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 TRAF1Q13077 416 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 HOMER1Q86YM7 354 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
LINC00958-201ENST00000504230 WASF1Q92558 559 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 PARK7Q99497 189 aaKnown RBP12.63□□□□□ -0.39
LINC00958-201ENST00000504230 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
LINC00958-201ENST00000504230 PNMA2Q9UL42 364 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 SMC3Q9UQE7 1217 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
LINC00958-201ENST00000504230 STK36Q9NRP7 1315 aa12.63□□□□□ -0.39
LINC00958-201ENST00000504230 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
LINC00958-201ENST00000504230 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00958-201ENST00000504230 VWA5AO00534 786 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 ZBTB5O15062 677 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 DEXIO95424 95 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
LINC00958-201ENST00000504230 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 FAM184AQ8NB25 1140 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 SMARCC2Q8TAQ2 1214 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 ATG4CQ96DT6 458 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 PIGSQ96S52 555 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 ZIC5Q96T25 663 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
LINC00958-201ENST00000504230 SLC38A10Q9HBR0 1119 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
LINC00958-201ENST00000504230 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
LINC00958-201ENST00000504230 PNMA6FA0A0J9YX94 578 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 JAK2O60674 1132 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
LINC00958-201ENST00000504230 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
LINC00958-201ENST00000504230 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 QRICH1Q2TAL8 776 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 LBX2Q6XYB7 198 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 MTMR8Q96EF0 704 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 ADAMTS5Q9UNA0 930 aa12.61□□□□□ -0.39
LINC00958-201ENST00000504230 hCG_1642624A0A1W2PR95 340 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 CYP2C8P10632 490 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 COL9A1P20849 921 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 OAZ1P54368 228 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 PFKFB3Q16875 520 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-201ENST00000504230 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 FBXO11Q86XK2 927 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-201ENST00000504230 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 ZFYVE28Q9HCC9 887 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 RABGAP1Q9Y3P9 1069 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 GOLGA8CPA6NN73 597 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 SCG2P13521 617 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-201ENST00000504230 XBP1P17861 261 aa12.6□□□□□ -0.39
LINC00958-201ENST00000504230 GJB2P29033 226 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms