RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 ERO1BQ86YB8 467 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 TBCKQ8TEA7 893 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 OTUD5Q96G74 571 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 CLIC6Q96NY7 704 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 DDX19AQ9NUU7 478 aaKnown RBP8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 DACT1Q9NYF0 836 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 CCPG1Q9ULG6 757 aa8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 MRPL11Q9Y3B7 192 aaKnown RBP8.1□□□□□ -1.11
GPATCH4-209ENST00000498641 ABCB11O95342 1321 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 A0A1B0GVL5 298 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 SYCE3A1L190 88 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 SPDYE3A6NKU9 549 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 GCOM1H8Y6P7 765 aaPredicted RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 TRAF5O00463 557 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 KINO60870 393 aaKnown RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 NR1I2O75469 434 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 ICAM1P05362 532 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 POLR2MP0CAP2 368 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 FDX1P10109 184 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 PTPREP23469 700 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 PPATQ06203 517 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 CAMK4Q16566 473 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 AXDND1Q5T1B0 1012 aaPredicted RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 GADL1Q6ZQY3 521 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 CPXCR1Q8N123 301 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 FERMT2Q96AC1 680 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 SLC10A4Q96EP9 437 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 CLMNQ96JQ2 1002 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 C12orf42Q96LP6 360 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 AGBL1Q96MI9 1066 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 NUP62CLQ9H1M0 184 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 TNMDQ9H2S6 317 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 GOLPH3LQ9H4A5 285 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 RAVER2Q9HCJ3 691 aaKnown RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 HOXC10Q9NYD6 342 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 FBXO2Q9UK22 296 aaPredicted RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 PNMA2Q9UL42 364 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 PPP1R9AQ9ULJ8 1098 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 SRPRBQ9Y5M8 271 aaKnown RBP8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 MRVI1Q9Y6F6 885 aa8.09□□□□□ -1.11
GPATCH4-209ENST00000498641 MYH4Q9Y623 1939 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 VWA3AA6NCI4 1184 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SPDYE5A6NIY4 337 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 LAD1O00515 517 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 WNT7AO00755 349 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CXCL11O14625 94 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 MARCH6O60337 910 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 NEMFO60524 1076 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CFBP00751 764 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 FOSP01100 380 aaPredicted RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 ALAS1P13196 640 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 PFKFB1P16118 471 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 HOXA13P31271 388 aaPredicted RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 DSG3P32926 999 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 NDUFA8P51970 172 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 ATP2C1P98194 919 aaPredicted RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 AP3B2Q13367 1082 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 COG2Q14746 738 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SPECC1Q5M775 1068 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 RESP18Q5W5W9 173 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SHC4Q6S5L8 630 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 DTHD1Q6ZMT9 781 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CATSPERGQ6ZRH7 1159 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 FCHSD1Q86WN1 690 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 MCF2L2Q86YR7 1114 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 OPTNQ96CV9 577 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 ATG4CQ96DT6 458 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 NAP1L4Q99733 375 aaKnown RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SDF4Q9BRK5 362 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CSRNP2Q9H175 543 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 CLSTN2Q9H4D0 955 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 SLC38A10Q9HBR0 1119 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 NMRK2Q9NPI5 230 aa8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 MORC2Q9Y6X9 1032 aaPredicted RBP8.08□□□□□ -1.12
GPATCH4-209ENST00000498641 WDR90Q96KV7 1748 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 GOLGA6L3A6NEY3 463 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 VWA5AO00534 786 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 MEIS2O14770 477 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 IRF6O14896 467 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 ZNF202O95125 648 aa8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 CELF2O95319 508 aaKnown RBP8.07□□□□□ -1.12
GPATCH4-209ENST00000498641 SYKP43405 635 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms