RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
MSH5-218ENST00000494646 ZMYM6O95789 1325 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 A0A1W2PQ45 241 aaPredicted RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 A0A1W2PQY0 241 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 MYADML2A6NDP7 307 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 ADCY6O43306 1168 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 DUSP11O75319 330 aaKnown RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 ICAM1P05362 532 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 C6orf222P0C671 652 aaPredicted RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 PDHBP11177 359 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 GSPT1P15170 499 aaKnown RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 ACLYP53396 1101 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 BTNL9Q6UXG8 535 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 NOL8Q76FK4 1167 aaKnown RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 EEPD1Q7L9B9 569 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 KLHDC9Q8NEP7 349 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
MSH5-218ENST00000494646 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
MSH5-218ENST00000494646 LCTP09848 1927 aa11.27□□□□□ -0.6
MSH5-218ENST00000494646 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.27□□□□□ -0.61
MSH5-218ENST00000494646 TRIM43BA6NCK2 446 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
MSH5-218ENST00000494646 PTGS1P23219 599 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 IMMTQ16891 758 aaKnown RBP11.27□□□□□ -0.61
MSH5-218ENST00000494646 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 BADQ92934 168 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 TRIM43Q96BQ3 446 aaPredicted RBP11.27□□□□□ -0.61
MSH5-218ENST00000494646 DSCC1Q9BVC3 393 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 KATNBL1Q9H079 304 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 VAT1LQ9HCJ6 419 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 STARD7Q9NQZ5 370 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 LAMA4Q16363 1823 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 ASTN1O14525 1302 aa11.27□□□□□ -0.61
MSH5-218ENST00000494646 PTPDC1A2A3K4 754 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 ASB14A6NK59 587 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 NFIBO00712 420 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 PQBP1O60828 265 aaKnown RBP11.26□□□□□ -0.61
MSH5-218ENST00000494646 ASGR1P07306 291 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 BEX3Q00994 111 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 TNFAIP2Q03169 654 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 SNX17Q15036 470 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 CCSAPQ6IQ19 270 aaPredicted RBP11.26□□□□□ -0.61
MSH5-218ENST00000494646 Q7L0L9 218 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 IQCA1Q86XH1 822 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 DGKHQ86XP1 1220 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
MSH5-218ENST00000494646 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
MSH5-218ENST00000494646 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 PDLIM7Q9NR12 457 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 CTNNA3Q9UI47 895 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 COL6A3P12111 3177 aa11.26□□□□□ -0.61
MSH5-218ENST00000494646 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
MSH5-218ENST00000494646 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 DYNC1LI2O43237 492 aaPredicted RBP11.25□□□□□ -0.61
MSH5-218ENST00000494646 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 ITGB8P26012 769 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 CALML3P27482 149 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 GJA9P57773 515 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 PTH1RQ03431 593 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 LRIT3Q3SXY7 679 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 USH1GQ495M9 461 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 C1orf53Q5VUE5 145 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 FBXO16Q8IX29 292 aaPredicted RBP11.25□□□□□ -0.61
MSH5-218ENST00000494646 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 TBC1D5Q92609 795 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
MSH5-218ENST00000494646 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 CLTBP09497 229 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 SMPD1P17405 629 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 CHMLP26374 656 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 FAAP100Q0VG06 881 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 SHHQ15465 462 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 IQSEC1Q6DN90 963 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 CYB5R4Q7L1T6 521 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 ENAHQ8N8S7 591 aaPredicted RBP11.24□□□□□ -0.61
MSH5-218ENST00000494646 PCSK9Q8NBP7 692 aaKnown RBP11.24□□□□□ -0.61
MSH5-218ENST00000494646 CLEC4DQ8WXI8 215 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 KRT23Q9C075 422 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 AP5M1Q9H0R1 490 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 TNKSO95271 1327 aa11.24□□□□□ -0.61
MSH5-218ENST00000494646 DCDC2CA8MYV0 355 aa11.23□□□□□ -0.61
MSH5-218ENST00000494646 CTAGE5O15320 804 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms