RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 IGHA2P01877 340 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 RCAN1P53805 252 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 UBXN2AP68543 259 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 MTFR1Q15390 333 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 USH1GQ495M9 461 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 FBXO11Q86XK2 927 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 CLEC4DQ8WXI8 215 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
COL1A1-208ENST00000494334 A1CFQ9NQ94 594 aaKnown RBP15.73■□□□□ 0.11
COL1A1-208ENST00000494334 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
COL1A1-208ENST00000494334 DIS3Q9Y2L1 958 aaKnown RBP15.73■□□□□ 0.11
COL1A1-208ENST00000494334 HTTP42858 3142 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 GOLGA8BA8MQT2 603 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 NFIBO00712 420 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-208ENST00000494334 CDC27P30260 824 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 EVCP57679 992 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 RTN1Q16799 776 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 MAML3Q96JK9 1138 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 AMNQ9BXJ7 453 aa15.72■□□□□ 0.11
COL1A1-208ENST00000494334 FAM217BQ9NTX9 383 aaPredicted RBP15.72■□□□□ 0.11
COL1A1-208ENST00000494334 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
COL1A1-208ENST00000494334 ABCB11O95342 1321 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 METAP2P50579 478 aaKnown RBP eCLIP15.71■□□□□ 0.11
COL1A1-208ENST00000494334 OLFML2BQ68BL8 750 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 PIBF1Q8WXW3 757 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 LARP6Q9BRS8 491 aaKnown RBP15.71■□□□□ 0.11
COL1A1-208ENST00000494334 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 CYP39A1Q9NYL5 469 aa15.71■□□□□ 0.11
COL1A1-208ENST00000494334 ZNF236Q9UL36 1845 aa15.71■□□□□ 0.1
COL1A1-208ENST00000494334 PFASO15067 1338 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 CCL5P13501 91 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 PDIA3P30101 505 aaKnown RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 CYP2C19P33261 490 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 ADD1P35611 737 aaKnown RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 CNTN2Q02246 1040 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 CACNB2Q08289 660 aaPredicted RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 BAATQ14032 418 aaPredicted RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 PPP2R5BQ15173 497 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 MAP3K21Q5TCX8 1036 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 MFSD14CQ5VZR4 134 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 RRP36Q96EU6 259 aaKnown RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 FGD4Q96M96 766 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 UNC93B1Q9H1C4 597 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 MRPL11Q9Y3B7 192 aaKnown RBP15.7■□□□□ 0.1
COL1A1-208ENST00000494334 PCDHA1Q9Y5I3 950 aa15.7■□□□□ 0.1
COL1A1-208ENST00000494334 RPTORQ8N122 1335 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 SMCHD1A6NHR9 2005 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 PTPDC1A2A3K4 754 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
COL1A1-208ENST00000494334 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
COL1A1-208ENST00000494334 FUT2Q10981 343 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 RNF207Q6ZRF8 634 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 PURBQ96QR8 312 aaKnown RBP15.69■□□□□ 0.1
COL1A1-208ENST00000494334 TINF2Q9BSI4 451 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 TMEM106CQ9BVX2 250 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 RNF208Q9H0X6 261 aa15.69■□□□□ 0.1
COL1A1-208ENST00000494334 CENPFP49454 3210 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 NID2Q14112 1375 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 CCDC196A0A1B0GTZ2 297 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 hCG_1642624A0A1W2PR95 340 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 SOWAHBA6NEL2 793 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 CAPN15O75808 1086 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 NEK4P51957 841 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 RPS6P62753 249 aaKnown RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 CCT2P78371 535 aaKnown RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 MAMDC4Q6UXC1 1216 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 SLC30A10Q6XR72 485 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 ZNF467Q7Z7K2 595 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 MCF2L2Q86YR7 1114 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 ZNF274Q96GC6 653 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 KIF2CQ99661 725 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 HMX1Q9NP08 348 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 SEC63Q9UGP8 760 aaKnown RBP15.68■□□□□ 0.1
COL1A1-208ENST00000494334 CNTNAP5Q8WYK1 1306 aa15.68■□□□□ 0.1
COL1A1-208ENST00000494334 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 OPLAHO14841 1288 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 CALML3P27482 149 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 CCND3P30281 292 aaPredicted RBP15.67■□□□□ 0.1
COL1A1-208ENST00000494334 AK2P54819 239 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 SOX10P56693 466 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 TRAF1Q13077 416 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 PRAMEF19Q5SWL8 479 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
COL1A1-208ENST00000494334 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 MAF1Q9H063 256 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 PAK6Q9NQU5 681 aaPredicted RBP15.67■□□□□ 0.1
COL1A1-208ENST00000494334 TPCN1Q9ULQ1 816 aa15.67■□□□□ 0.1
COL1A1-208ENST00000494334 V9GY48 417 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms