RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 LENG1Q96BZ8 264 aaPredicted RBP17.63■□□□□ 0.41
USP39-217ENST00000491659 UBA5Q9GZZ9 404 aa17.63■□□□□ 0.41
USP39-217ENST00000491659 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
USP39-217ENST00000491659 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
USP39-217ENST00000491659 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
USP39-217ENST00000491659 NFIBO00712 420 aa17.62■□□□□ 0.41
USP39-217ENST00000491659 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 ATN1P54259 1190 aaPredicted RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 CDC37Q16543 378 aaPredicted RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 LSG1Q9H089 658 aaKnown RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 ANO2Q9NQ90 1003 aa17.62■□□□□ 0.41
USP39-217ENST00000491659 ADD3Q9UEY8 706 aaKnown RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
USP39-217ENST00000491659 PGK1P00558 417 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 BAATQ14032 418 aaPredicted RBP17.61■□□□□ 0.41
USP39-217ENST00000491659 WTAPQ15007 396 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 CCDC144BQ3MJ40 725 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 USH1GQ495M9 461 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 ADGRF4Q8IZF3 695 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 TAF6LQ9Y6J9 622 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 SYNRGQ9UMZ2 1314 aa17.61■□□□□ 0.41
USP39-217ENST00000491659 ADAMTS4O75173 837 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 DUSP11O75319 330 aaKnown RBP17.6■□□□□ 0.41
USP39-217ENST00000491659 ADCYAP1R1P41586 468 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 RTP1P59025 263 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 RNF207Q6ZRF8 634 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 MPHOSPH6Q99547 160 aaKnown RBP17.6■□□□□ 0.41
USP39-217ENST00000491659 SPC25Q9HBM1 224 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 PHF24Q9UPV7 400 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 ABCB11O95342 1321 aa17.6■□□□□ 0.41
USP39-217ENST00000491659 ASTN1O14525 1302 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 LOC102724159A0A0B4J2E5 919 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 CDC45O75419 566 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 SYN1P17600 705 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 CALML3P27482 149 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 ALDH5A1P51649 535 aaPredicted RBP17.59■□□□□ 0.41
USP39-217ENST00000491659 PWP2Q15269 919 aaKnown RBP17.59■□□□□ 0.41
USP39-217ENST00000491659 TMEM67Q5HYA8 995 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 SLC30A10Q6XR72 485 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 SLC39A5Q6ZMH5 540 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
USP39-217ENST00000491659 CLEC4DQ8WXI8 215 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 FERMT2Q96AC1 680 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 KATNBL1Q9H079 304 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
USP39-217ENST00000491659 ATP11BQ9Y2G3 1177 aa17.59■□□□□ 0.41
USP39-217ENST00000491659 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 FBXO11Q86XK2 927 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.4
USP39-217ENST00000491659 TSEN34Q9BSV6 310 aaKnown RBP17.58■□□□□ 0.4
USP39-217ENST00000491659 JMJD4Q9H9V9 463 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 VAT1LQ9HCJ6 419 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 VTA1Q9NP79 307 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 PRKAG2Q9UGJ0 569 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 MAD2L2Q9UI95 211 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 LTBP2Q14767 1821 aa17.58■□□□□ 0.4
USP39-217ENST00000491659 A0A1W2PQ45 241 aaPredicted RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 A0A1W2PQY0 241 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 KLRF2D3W0D1 207 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 SLC27A2O14975 620 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 ADCY6O43306 1168 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 C6orf222P0C671 652 aaPredicted RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 ANTXR2P58335 489 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 GRM4Q14833 912 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 SNX17Q15036 470 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 CATIPQ7Z7H3 387 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 FBXO16Q8IX29 292 aaPredicted RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 PCSK9Q8NBP7 692 aaKnown RBP17.57■□□□□ 0.4
USP39-217ENST00000491659 MAF1Q9H063 256 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 PRO3102Q9H379 93 aa17.57■□□□□ 0.4
USP39-217ENST00000491659 A0A1W2PPC1 479 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 PALM3A6NDB9 673 aaPredicted RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 MOXD2PA6NHM9 499 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 B4DLN1 442 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 SLC34A2O95436 690 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 CST5P28325 142 aaPredicted RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 MCM5P33992 734 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 GJA9P57773 515 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 MCF2L2Q86YR7 1114 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 KLHDC9Q8NEP7 349 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 MORC4Q8TE76 937 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
USP39-217ENST00000491659 MRPL11Q9Y3B7 192 aaKnown RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 DDX49Q9Y6V7 483 aaKnown RBP17.56■□□□□ 0.4
USP39-217ENST00000491659 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.55■□□□□ 0.4
USP39-217ENST00000491659 MYADML2A6NDP7 307 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms