RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 TRIM22Q8IYM9 498 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 RBM46Q8TBY0 533 aaKnown RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 ZSCAN10Q96SZ4 725 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 ZIC5Q96T25 663 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 TMX1Q9H3N1 280 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 ZNF112Q9UJU3 913 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 V9GYY5 206 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 MMP1P03956 469 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 TOP1P11387 765 aaKnown RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 GJA5P36382 358 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 SPP2Q13103 211 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 SART3Q15020 963 aaKnown RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 PAXIP1Q6ZW49 1069 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 HOMER1Q86YM7 354 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 C2orf69Q8N8R5 385 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 NUP88Q99567 741 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 CPVLQ9H3G5 476 aa20.76■□□□□ 0.91
COL16A1-215ENST00000488897 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
COL16A1-215ENST00000488897 PTPRAP18433 802 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 IREB2P48200 963 aaKnown RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 ETF1P62495 437 aaKnown RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 FCHSD1Q86WN1 690 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 CMTR1Q8N1G2 835 aaKnown RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 UBAC1Q9BSL1 405 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 OTOFQ9HC10 1997 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 PHLPP2Q6ZVD8 1323 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 CTNND1O60716 968 aaKnown RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 KIF20AO95235 890 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 GABPB1Q06547 395 aaPredicted RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 RILPL1Q5EBL4 403 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 TMTC2Q8N394 836 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 NEDD1Q8NHV4 660 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 FOXP1Q9H334 677 aaPredicted RBP20.75■□□□□ 0.91
COL16A1-215ENST00000488897 CABP5Q9NP86 173 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 FANCLQ9NW38 375 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
COL16A1-215ENST00000488897 IRF6O14896 467 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
COL16A1-215ENST00000488897 ICA1Q05084 483 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 ARMC9Q7Z3E5 817 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 SAPCD2Q86UD0 394 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 SCYL3Q8IZE3 742 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 CCDC196A0A1B0GTZ2 297 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 BTBD18B2RXH4 712 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 PTPREP23469 700 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 RTN1Q16799 776 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 FBXO38Q6PIJ6 1188 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 DIS3L2Q8IYB7 885 aaKnown RBP20.74■□□□□ 0.91
COL16A1-215ENST00000488897 OPTNQ96CV9 577 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 DACH1Q9UI36 760 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 CSADQ9Y600 493 aa20.74■□□□□ 0.91
COL16A1-215ENST00000488897 ERICH2A1L162 156 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 RCAN1P53805 252 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 MTMR2Q13614 643 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 WTAPQ15007 396 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 TMEM47Q9BQJ4 181 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 PICK1Q9NRD5 415 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.73■□□□□ 0.91
COL16A1-215ENST00000488897 ZSCAN12O43309 604 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 DEXIO95424 95 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 SEC23AQ15436 765 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 ANKRD13AQ8IZ07 590 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 KRT222Q8N1A0 295 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 CCDC82Q8N4S0 544 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 ZNF579Q8NAF0 562 aaKnown RBP20.73■□□□□ 0.91
COL16A1-215ENST00000488897 SLC10A4Q96EP9 437 aa20.73■□□□□ 0.91
COL16A1-215ENST00000488897 TOB1P50616 345 aaPredicted RBP20.72■□□□□ 0.91
COL16A1-215ENST00000488897 POSTNQ15063 836 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 CYP4F22Q6NT55 531 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 IQCA1Q86XH1 822 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 MLKLQ8NB16 471 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 NUP133Q8WUM0 1156 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 ZNF287Q9HBT7 754 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 CEP131Q9UPN4 1083 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 ATAD5Q96QE3 1844 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 IGKV6D-41A0A0C4DH26 115 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 PEX10O60683 326 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 NT5DC1Q5TFE4 455 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 KANK3Q6NY19 840 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 TMEM179Q6ZVK1 233 aa20.72■□□□□ 0.91
COL16A1-215ENST00000488897 SRRTQ9BXP5 876 aaKnown RBP20.72■□□□□ 0.91
COL16A1-215ENST00000488897 FBXO2Q9UK22 296 aaPredicted RBP20.72■□□□□ 0.91
COL16A1-215ENST00000488897 ARHGAP6O43182 974 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 ASNSP08243 561 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 IFIT1BQ5T764 474 aaKnown RBP20.71■□□□□ 0.91
COL16A1-215ENST00000488897 TRIML1Q8N9V2 468 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 FAM53CQ9NYF3 392 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 MAN1B1Q9UKM7 699 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 BRCA2P51587 3418 aa20.71■□□□□ 0.91
COL16A1-215ENST00000488897 TMEM88BA6NKF7 163 aa20.7■□□□□ 0.91
COL16A1-215ENST00000488897 BMP6P22004 513 aa20.7■□□□□ 0.91
COL16A1-215ENST00000488897 ZNF157P51786 506 aaPredicted RBP20.7■□□□□ 0.91
COL16A1-215ENST00000488897 HMGCS2P54868 508 aa20.7■□□□□ 0.91
COL16A1-215ENST00000488897 DNAI1Q9UI46 699 aa20.7■□□□□ 0.91
COL16A1-215ENST00000488897 FRMPD2Q68DX3 1309 aaPredicted RBP20.7■□□□□ 0.9
COL16A1-215ENST00000488897 BAZ2BQ9UIF8 2168 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms