RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 ZNF512BQ96KM6 892 aaPredicted RBP18.44■□□□□ 0.54
U2AF1-211ENST00000486519 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
U2AF1-211ENST00000486519 RAVER2Q9HCJ3 691 aaKnown RBP18.44■□□□□ 0.54
U2AF1-211ENST00000486519 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
U2AF1-211ENST00000486519 ERVK-21P61565 698 aa18.43■□□□□ 0.54
U2AF1-211ENST00000486519 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
U2AF1-211ENST00000486519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
U2AF1-211ENST00000486519 MFSD14AQ96MC6 490 aa18.43■□□□□ 0.54
U2AF1-211ENST00000486519 DCP1AQ9NPI6 582 aaPredicted RBP18.43■□□□□ 0.54
U2AF1-211ENST00000486519 LINC01553A4QN01 128 aa18.42■□□□□ 0.54
U2AF1-211ENST00000486519 SLF1Q9BQI6 1058 aa18.42■□□□□ 0.54
U2AF1-211ENST00000486519 CCDC8Q9H0W5 538 aaPredicted RBP18.42■□□□□ 0.54
U2AF1-211ENST00000486519 SH2D4AQ9H788 454 aa18.42■□□□□ 0.54
U2AF1-211ENST00000486519 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 MYH4Q9Y623 1939 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 MAGEB6P1A0A0J9YX57 407 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 RGS20O76081 388 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 PTPN5P54829 565 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 FOXK2Q01167 660 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 TAPT1Q6NXT6 567 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.41■□□□□ 0.54
U2AF1-211ENST00000486519 EEPD1Q7L9B9 569 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 FBXO16Q8IX29 292 aaPredicted RBP18.41■□□□□ 0.54
U2AF1-211ENST00000486519 ANKRD35Q8N283 1001 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 LCORLQ8N3X6 602 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 C17orf80Q9BSJ5 609 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.41■□□□□ 0.54
U2AF1-211ENST00000486519 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
U2AF1-211ENST00000486519 ZFHX2Q9C0A1 2572 aaPredicted RBP18.41■□□□□ 0.54
U2AF1-211ENST00000486519 MYO7AQ13402 2215 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 PRKAB2O43741 272 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 SLFNL1Q499Z3 407 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 CERS3Q8IU89 383 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 TGS1Q96RS0 853 aaKnown RBP18.4■□□□□ 0.54
U2AF1-211ENST00000486519 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
U2AF1-211ENST00000486519 RFC2P35250 354 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 CDK8P49336 464 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 ADHFE1Q8IWW8 467 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 HOMER2Q9NSB8 354 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 SWAP70Q9UH65 585 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 TNNQ9UQP3 1299 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 NLRC5Q86WI3 1866 aa18.39■□□□□ 0.53
U2AF1-211ENST00000486519 ATP2A1O14983 1001 aa18.38■□□□□ 0.53
U2AF1-211ENST00000486519 PURAQ00577 322 aaKnown RBP18.38■□□□□ 0.53
U2AF1-211ENST00000486519 FAM117BQ6P1L5 589 aa18.38■□□□□ 0.53
U2AF1-211ENST00000486519 PURBQ96QR8 312 aaKnown RBP18.38■□□□□ 0.53
U2AF1-211ENST00000486519 ZBED2Q9BTP6 218 aa18.38■□□□□ 0.53
U2AF1-211ENST00000486519 CRNKL1Q9BZJ0 848 aaKnown RBP18.38■□□□□ 0.53
U2AF1-211ENST00000486519 GOPCQ9HD26 462 aa18.38■□□□□ 0.53
U2AF1-211ENST00000486519 DMDP11532 3685 aa18.38■□□□□ 0.53
U2AF1-211ENST00000486519 ZEB2O60315 1214 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 IGSF3O75054 1194 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 SUPT20HL2P0C7V6 817 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 KCNJ6P48051 423 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-211ENST00000486519 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 EP400NLQ6ZTU2 488 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
U2AF1-211ENST00000486519 SEZ6LQ9BYH1 1024 aa18.37■□□□□ 0.53
U2AF1-211ENST00000486519 BAIAP3O94812 1187 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 GJB5O95377 273 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 NDUFB10O96000 172 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 GNAI3P08754 354 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 PDE6AP16499 860 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 LTBRP36941 435 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 CLUL1Q15846 466 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 PUS10Q3MIT2 529 aaKnown RBP18.36■□□□□ 0.53
U2AF1-211ENST00000486519 RNF135Q8IUD6 432 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 KIFC2Q96AC6 838 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 CTAGE1Q96RT6 745 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 ARMT1Q9H993 441 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 SLC38A10Q9HBR0 1119 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
U2AF1-211ENST00000486519 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
U2AF1-211ENST00000486519 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 MYL3P08590 195 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 VCPP55072 806 aaKnown RBP18.35■□□□□ 0.53
U2AF1-211ENST00000486519 COL19A1Q14993 1142 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 ASCL5Q7RTU5 278 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 EDAQ92838 391 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 API5Q9BZZ5 524 aaKnown RBP18.35■□□□□ 0.53
U2AF1-211ENST00000486519 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
U2AF1-211ENST00000486519 MICAL3Q7RTP6 2002 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 TMEM221A6NGB7 291 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 M0R296 226 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 DLX2Q07687 328 aaPredicted RBP18.34■□□□□ 0.53
U2AF1-211ENST00000486519 POLA2Q14181 598 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 BMP8AQ7Z5Y6 402 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 PRPF38AQ8NAV1 312 aaKnown RBP18.34■□□□□ 0.53
U2AF1-211ENST00000486519 RETREG2Q8NC44 543 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 FBXO22Q8NEZ5 403 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 PBXIP1Q96AQ6 731 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 PABPC5Q96DU9 382 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms