RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 TMEM47Q9BQJ4 181 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 RANBP17Q9H2T7 1088 aaKnown RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 PRO3102Q9H379 93 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 IL17RBQ9NRM6 502 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 RIPK3Q9Y572 518 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 MYH7BA7E2Y1 1941 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 WDR19Q8NEZ3 1342 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 A0A1W2PQ45 241 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 A0A1W2PQY0 241 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 SMIM22K7EJ46 135 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 KPNA6O60684 536 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 PARP1P09874 1014 aaKnown RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 PDHBP11177 359 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 CPT1AP50416 773 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 ACLYP53396 1101 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 GJA9P57773 515 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 HAND2P61296 217 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 MDM2Q00987 491 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 ZNF543Q08ER8 600 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 IFIT1BQ5T764 474 aaKnown RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 RNF207Q6ZRF8 634 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 CCDC144CPQ8IYA2 1237 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 TMEM199Q8N511 208 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 FAM133AQ8N9E0 248 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 PNMA1Q8ND90 353 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 RGS22Q8NE09 1264 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 ZSCAN10Q96SZ4 725 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 A1CFQ9NQ94 594 aaKnown RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 TMEM39AQ9NV64 488 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 CYP39A1Q9NYL5 469 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 MRPL11Q9Y3B7 192 aaKnown RBP8.74□□□□□ -1.01
CPNE1-226ENST00000486021 ABCB11O95342 1321 aa8.74□□□□□ -1.01
CPNE1-226ENST00000486021 KDM4AO75164 1064 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 SNAI1O95863 264 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-226ENST00000486021 PGK1P00558 417 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 IGHDP01880 384 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 SUPT20HL2P0C7V6 817 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 PDE4DQ08499 809 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 PPIGQ13427 754 aaKnown RBP eCLIP8.73□□□□□ -1.011e-12■■■□□ 16.3
CPNE1-226ENST00000486021 KCNA10Q16322 511 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 TTC22Q5TAA0 569 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 ANKRD33Q7Z3H0 272 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 ZNF589Q86UQ0 364 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-226ENST00000486021 TMTC2Q8N394 836 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 NCOA7Q8NI08 942 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 FERMT2Q96AC1 680 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 SYNRGQ9UMZ2 1314 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 BRCA2P51587 3418 aa8.73□□□□□ -1.01
CPNE1-226ENST00000486021 ARVCFO00192 962 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 NMT2O60551 498 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ADAMTS4O75173 837 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ASGR1P07306 291 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 SNHG28P0DPA3 235 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-226ENST00000486021 NKX3-2P78367 333 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 FPGSQ05932 587 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 TRIM60Q495X7 471 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ZNF697Q5TEC3 545 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 FAM109BQ6ICB4 259 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-226ENST00000486021 KCNV1Q6PIU1 500 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 TLK2Q86UE8 772 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 RPUSD2Q8IZ73 545 aaKnown RBP8.72□□□□□ -1.01
CPNE1-226ENST00000486021 KLHDC9Q8NEP7 349 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ANKS1AQ92625 1134 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 IWS1Q96ST2 819 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 MTA3Q9BTC8 594 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 UPF3AQ9H1J1 476 aaKnown RBP8.72□□□□□ -1.01
CPNE1-226ENST00000486021 ZNF536O15090 1300 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 TNKSO95271 1327 aa8.72□□□□□ -1.01
CPNE1-226ENST00000486021 FRMPD2Q68DX3 1309 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-226ENST00000486021 LRRC37A2A6NM11 1700 aa8.71□□□□□ -1.01
CPNE1-226ENST00000486021 KAT6AQ92794 2004 aa8.71□□□□□ -1.01
CPNE1-226ENST00000486021 TMEM265A0A087WTH1 108 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 B4E1Z4 1266 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 PQBP1O60828 265 aaKnown RBP8.71□□□□□ -1.02
CPNE1-226ENST00000486021 CALML3P27482 149 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 KIF5BP33176 963 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 SLC16A2P36021 539 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 TLE2Q04725 743 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 BAATQ14032 418 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-226ENST00000486021 TTLL4Q14679 1199 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 PPP2R5BQ15173 497 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 STXBP2Q15833 593 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 FSCN1Q16658 493 aaKnown RBP8.71□□□□□ -1.02
CPNE1-226ENST00000486021 FBXO11Q86XK2 927 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 CCDC155Q8N6L0 562 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 MORC4Q8TE76 937 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 NSUN6Q8TEA1 469 aaKnown RBP8.71□□□□□ -1.02
CPNE1-226ENST00000486021 SCFD2Q8WU76 684 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 AMNQ9BXJ7 453 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 PDLIM7Q9NR12 457 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 ZSWIM5Q9P217 1185 aa8.71□□□□□ -1.02
CPNE1-226ENST00000486021 MKI67P46013 3256 aaKnown RBP8.71□□□□□ -1.02
CPNE1-226ENST00000486021 LCTP09848 1927 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms