RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.42
DDX56-212ENST00000485367 COL6A1P12109 1028 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 NOVP48745 357 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 OAZ1P54368 228 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 SNAP25P60880 206 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 CCDC174Q6PII3 467 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 HOMER2Q9NSB8 354 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 TCP11L1Q9NUJ3 509 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 FBXO40Q9UH90 709 aa12.46□□□□□ -0.42
DDX56-212ENST00000485367 HMGN5P82970 282 aaKnown RBP12.45□□□□□ -0.42
DDX56-212ENST00000485367 GJC2Q5T442 439 aaPredicted RBP12.45□□□□□ -0.42
DDX56-212ENST00000485367 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 ARRDC4Q8NCT1 418 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 DCAF4Q8WV16 495 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 AGBL1Q96MI9 1066 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
DDX56-212ENST00000485367 PRR12Q9ULL5 1215 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
DDX56-212ENST00000485367 NEDD4P46934 1319 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 DNAJC25-GNG10A0A024R161 153 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 PLA2G6O60733 806 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
DDX56-212ENST00000485367 TAL1P17542 331 aaPredicted RBP12.44□□□□□ -0.42
DDX56-212ENST00000485367 UVSSAQ2YD98 709 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 TTBK2Q6IQ55 1244 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
DDX56-212ENST00000485367 ESR2Q92731 530 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 ZKSCAN3Q9BRR0 538 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 DSCC1Q9BVC3 393 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
DDX56-212ENST00000485367 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
DDX56-212ENST00000485367 ZNF536O15090 1300 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 FRMPD2Q68DX3 1309 aaPredicted RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 DNM1LO00429 736 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 ALAS1P13196 640 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 SLC16A2P36021 539 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 IMMTQ16891 758 aaKnown RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 LRRC26Q2I0M4 334 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 TTC14Q96N46 770 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 CCDC94Q9BW85 323 aaPredicted RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 ACAD9Q9H845 621 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 RNF146Q9NTX7 359 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 KBTBD13C9JR72 458 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 KDM4AO75164 1064 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 SYN1P17600 705 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 GTF2F1P35269 517 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■■ 30.9
DDX56-212ENST00000485367 ATN1P54259 1190 aaPredicted RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 DMTNQ08495 405 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
DDX56-212ENST00000485367 TRERF1Q96PN7 1200 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 IL25Q9H293 177 aa12.43□□□□□ -0.42
DDX56-212ENST00000485367 MCM3APO60318 1980 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 B4E1Z4 1266 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
DDX56-212ENST00000485367 ZNF865P0CJ78 1059 aaPredicted RBP12.42□□□□□ -0.42
DDX56-212ENST00000485367 RARBP10826 455 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 TKFCQ3LXA3 575 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 SYDE2Q5VT97 1194 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX56-212ENST00000485367 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
DDX56-212ENST00000485367 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
DDX56-212ENST00000485367 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
DDX56-212ENST00000485367 SYNGAP1Q96PV0 1343 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 PDHBP11177 359 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 CHMLP26374 656 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 CNTN2Q02246 1040 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 MAMDC4Q6UXC1 1216 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 ZNF467Q7Z7K2 595 aaPredicted RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 IQCA1Q86XH1 822 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 RUFY2Q8WXA3 655 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 SYCE3A1L190 88 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 AKR1A1P14550 325 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 ADCYAP1R1P41586 468 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 ZNF543Q08ER8 600 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 LRRC41Q15345 812 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 CCDC178Q5BJE1 867 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 MUM1L1Q5H9M0 696 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 LENG1Q96BZ8 264 aaPredicted RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 FGD4Q96M96 766 aa12.41□□□□□ -0.42
DDX56-212ENST00000485367 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 A1CFQ9NQ94 594 aaKnown RBP12.41□□□□□ -0.42
DDX56-212ENST00000485367 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms