RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 CTAGE5O15320 804 aa22.84■■□□□ 1.25
CHPF2-203ENST00000482173 BEX3Q00994 111 aa22.84■■□□□ 1.25
CHPF2-203ENST00000482173 TTBK2Q6IQ55 1244 aa22.84■■□□□ 1.25
CHPF2-203ENST00000482173 CYP39A1Q9NYL5 469 aa22.84■■□□□ 1.25
CHPF2-203ENST00000482173 HSPD1P10809 573 aaKnown RBP22.83■■□□□ 1.25
CHPF2-203ENST00000482173 TOP1P11387 765 aaKnown RBP22.83■■□□□ 1.25
CHPF2-203ENST00000482173 NKX3-2P78367 333 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 NMIQ13287 307 aaPredicted RBP22.83■■□□□ 1.25
CHPF2-203ENST00000482173 NSMFQ6X4W1 530 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 TICAM2Q86XR7 235 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 TMEM47Q9BQJ4 181 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 LNPKQ9C0E8 428 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
CHPF2-203ENST00000482173 A0A0C4DFX4 3053 aa22.83■■□□□ 1.25
CHPF2-203ENST00000482173 ASTN1O14525 1302 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 TRIM6-TRIM34B2RNG4 842 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 ICAM1P05362 532 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 SLC16A2P36021 539 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 MFSD5Q6N075 450 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 EEPD1Q7L9B9 569 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 AP5M1Q9H0R1 490 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 RANBP17Q9H2T7 1088 aaKnown RBP22.82■■□□□ 1.24
CHPF2-203ENST00000482173 TTYH1Q9H313 450 aaPredicted RBP22.82■■□□□ 1.24
CHPF2-203ENST00000482173 GPCPD1Q9NPB8 672 aa22.82■■□□□ 1.24
CHPF2-203ENST00000482173 GNEQ9Y223 722 aaKnown RBP22.82■■□□□ 1.24
CHPF2-203ENST00000482173 TLR3O15455 904 aaKnown RBP22.81■■□□□ 1.24
CHPF2-203ENST00000482173 HAND2P61296 217 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 SYDE2Q5VT97 1194 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 IQSEC1Q6DN90 963 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 BTNL9Q6UXG8 535 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 ZNF589Q86UQ0 364 aaPredicted RBP22.81■■□□□ 1.24
CHPF2-203ENST00000482173 RILPL2Q969X0 211 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 PURBQ96QR8 312 aaKnown RBP22.81■■□□□ 1.24
CHPF2-203ENST00000482173 PDGFCQ9NRA1 345 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 TCP11L1Q9NUJ3 509 aa22.81■■□□□ 1.24
CHPF2-203ENST00000482173 FRMPD2Q68DX3 1309 aaPredicted RBP22.81■■□□□ 1.24
CHPF2-203ENST00000482173 DYNC1LI2O43237 492 aaPredicted RBP22.8■■□□□ 1.24
CHPF2-203ENST00000482173 SMPD1P17405 629 aa22.8■■□□□ 1.24
CHPF2-203ENST00000482173 FSCN1Q16658 493 aaKnown RBP22.8■■□□□ 1.24
CHPF2-203ENST00000482173 CXCL17Q6UXB2 119 aa22.8■■□□□ 1.24
CHPF2-203ENST00000482173 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
CHPF2-203ENST00000482173 FAM126BQ8IXS8 530 aa22.8■■□□□ 1.24
CHPF2-203ENST00000482173 BAATQ14032 418 aaPredicted RBP22.79■■□□□ 1.24
CHPF2-203ENST00000482173 B4GALNT3Q6L9W6 998 aa22.79■■□□□ 1.24
CHPF2-203ENST00000482173 TAPT1Q6NXT6 567 aa22.79■■□□□ 1.24
CHPF2-203ENST00000482173 MFSD6Q6ZSS7 791 aa22.79■■□□□ 1.24
CHPF2-203ENST00000482173 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHPF2-203ENST00000482173 FBXO16Q8IX29 292 aaPredicted RBP22.79■■□□□ 1.24
CHPF2-203ENST00000482173 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHPF2-203ENST00000482173 ZMYM6O95789 1325 aa22.79■■□□□ 1.24
CHPF2-203ENST00000482173 CCDC171Q6TFL3 1326 aa22.79■■□□□ 1.24
CHPF2-203ENST00000482173 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.78■■□□□ 1.24
CHPF2-203ENST00000482173 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.78■■□□□ 1.24
CHPF2-203ENST00000482173 CABYRO75952 493 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 PTGS1P23219 599 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 PPIGQ13427 754 aaKnown RBP eCLIP22.78■■□□□ 1.244e-6■■□□□ 13.2
CHPF2-203ENST00000482173 AKNAD1Q5T1N1 836 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 KIAA1211Q6ZU35 1233 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 TMEM199Q8N511 208 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 MYLIPQ8WY64 445 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 PPP1R12CQ9BZL4 782 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 VTA1Q9NP79 307 aa22.78■■□□□ 1.24
CHPF2-203ENST00000482173 ADD3Q9UEY8 706 aaKnown RBP22.78■■□□□ 1.24
CHPF2-203ENST00000482173 NFIBO00712 420 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 ZEB2O60315 1214 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 CD4P01730 458 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 CSF2RAP15509 400 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 AAMPQ13685 434 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 TMEM63BQ5T3F8 832 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 C16orf59Q7L2K0 433 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 SMC5Q8IY18 1101 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 MORC4Q8TE76 937 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 TTC14Q96N46 770 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 RWDD1Q9H446 243 aaPredicted RBP22.77■■□□□ 1.24
CHPF2-203ENST00000482173 Q9Y3F1 56 aa22.77■■□□□ 1.24
CHPF2-203ENST00000482173 TMEM265A0A087WTH1 108 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 PDHBP11177 359 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 PCP11498 1178 aaKnown RBP22.76■■□□□ 1.23
CHPF2-203ENST00000482173 SDSP20132 328 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 MFAP1P55081 439 aaKnown RBP22.76■■□□□ 1.23
CHPF2-203ENST00000482173 ITGA7Q13683 1181 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 TMEM240Q5SV17 173 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 SLC43A3Q8NBI5 491 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 MAFAQ8NHW3 353 aaPredicted RBP22.76■■□□□ 1.23
CHPF2-203ENST00000482173 CUL9Q8IWT3 2517 aa22.76■■□□□ 1.23
CHPF2-203ENST00000482173 LCTP09848 1927 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 LRRC37A2A6NM11 1700 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 PTPDC1A2A3K4 754 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 ACRP10323 421 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 CYP2C18P33260 490 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 ALDH5A1P51649 535 aaPredicted RBP22.75■■□□□ 1.23
CHPF2-203ENST00000482173 TBC1D10CQ8IV04 446 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 GRIN2DO15399 1336 aa22.75■■□□□ 1.23
CHPF2-203ENST00000482173 FOSL2P15408 326 aa22.74■■□□□ 1.23
CHPF2-203ENST00000482173 DNAJB2P25686 324 aa22.74■■□□□ 1.23
CHPF2-203ENST00000482173 ZNF543Q08ER8 600 aa22.74■■□□□ 1.23
CHPF2-203ENST00000482173 ZNF365Q70YC5 407 aa22.74■■□□□ 1.23
CHPF2-203ENST00000482173 CHD1LQ86WJ1 897 aa22.74■■□□□ 1.23
CHPF2-203ENST00000482173 RNF41Q9H4P4 317 aaPredicted RBP22.74■■□□□ 1.23
CHPF2-203ENST00000482173 PNMA2Q9UL42 364 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms