RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
PTPRF-213ENST00000481019 TKFCQ3LXA3 575 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 USH1GQ495M9 461 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 MFSD14CQ5VZR4 134 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 LHX8Q68G74 356 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 DHX32Q7L7V1 743 aaKnown RBP14.25□□□□□ -0.13
PTPRF-213ENST00000481019 CATIPQ7Z7H3 387 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 CCDC144CPQ8IYA2 1237 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 CMTR1Q8N1G2 835 aaKnown RBP14.25□□□□□ -0.13
PTPRF-213ENST00000481019 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 DDX11Q96FC9 970 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
PTPRF-213ENST00000481019 CYP39A1Q9NYL5 469 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 FBXO40Q9UH90 709 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 MCM3APO60318 1980 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
PTPRF-213ENST00000481019 WDR19Q8NEZ3 1342 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 DDAH1O94760 285 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 SNAI1O95863 264 aaPredicted RBP14.24□□□□□ -0.13
PTPRF-213ENST00000481019 LIFRP42702 1097 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 ANO1Q5XXA6 986 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 NSMFQ6X4W1 530 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 SLC30A10Q6XR72 485 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 NFXL1Q6ZNB6 911 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 UBE2Q1Q7Z7E8 422 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 DIS3LQ8TF46 1054 aaKnown RBP14.24□□□□□ -0.13
PTPRF-213ENST00000481019 PIBF1Q8WXW3 757 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 PIGSQ96S52 555 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 RIOX1Q9H6W3 641 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
PTPRF-213ENST00000481019 DIS3Q9Y2L1 958 aaKnown RBP14.24□□□□□ -0.13
PTPRF-213ENST00000481019 MYH6P13533 1939 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 CCDC69A6NI79 296 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 POTEB2H3BUK9 544 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 OPLAHO14841 1288 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 DHX16O60231 1041 aaKnown RBP14.23□□□□□ -0.13
PTPRF-213ENST00000481019 BAATQ14032 418 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-213ENST00000481019 KRT32Q14532 448 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 SGMS1Q86VZ5 419 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
PTPRF-213ENST00000481019 LENG1Q96BZ8 264 aaPredicted RBP14.23□□□□□ -0.13
PTPRF-213ENST00000481019 LRRC37A2A6NM11 1700 aa14.23□□□□□ -0.13
PTPRF-213ENST00000481019 DNAH12Q6ZR08 3092 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 TFRCP02786 760 aaKnown RBP14.22□□□□□ -0.13
PTPRF-213ENST00000481019 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
PTPRF-213ENST00000481019 RPS6KB1P23443 525 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 CNGA1P29973 690 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 APOBRQ0VD83 1088 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 APOA5Q6Q788 366 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 MAMDC4Q6UXC1 1216 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 Q6ZUG5 572 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 HOMER1Q86YM7 354 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 IL27Q8NEV9 243 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 KATNBL1Q9H079 304 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 COL20A1Q9P218 1284 aa14.22□□□□□ -0.13
PTPRF-213ENST00000481019 hCG_1642624A0A1W2PR95 340 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 ZBTB5O15062 677 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 ADCY6O43306 1168 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 PTGS1P23219 599 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 CALML3P27482 149 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 MLLT1Q03111 559 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 MICU3Q86XE3 530 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 TMTC2Q8N394 836 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 FAM217BQ9NTX9 383 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 DDX20Q9UHI6 824 aaKnown RBP14.21□□□□□ -0.13
PTPRF-213ENST00000481019 OGDHLQ9ULD0 1010 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.13
PTPRF-213ENST00000481019 PFASO15067 1338 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 CDC27P30260 824 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 RPS6P62753 249 aaKnown RBP14.2□□□□□ -0.14
PTPRF-213ENST00000481019 IRX5P78411 483 aaPredicted RBP14.2□□□□□ -0.14
PTPRF-213ENST00000481019 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 ARMCX2Q7L311 632 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 CCDC82Q8N4S0 544 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 FANCBQ8NB91 859 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
PTPRF-213ENST00000481019 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
PTPRF-213ENST00000481019 UPF3BQ9BZI7 483 aaKnown RBP14.2□□□□□ -0.14
PTPRF-213ENST00000481019 ZSWIM6Q9HCJ5 1215 aa14.2□□□□□ -0.14
PTPRF-213ENST00000481019 ABCB11O95342 1321 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 SYNGAP1Q96PV0 1343 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 SEPT4O43236 478 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 FARP2O94887 1054 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 ANP32AP39687 249 aaKnown RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 FUT2Q10981 343 aa14.19□□□□□ -0.14
PTPRF-213ENST00000481019 TOB2Q14106 344 aaPredicted RBP14.19□□□□□ -0.14
PTPRF-213ENST00000481019 RNF207Q6ZRF8 634 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms