RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 COBLO75128 1261 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 HMGCRP04035 888 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 ELNP15502 786 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
ATG4B-219ENST00000479941 METAP2P50579 478 aaKnown RBP eCLIP12.56□□□□□ -0.4
ATG4B-219ENST00000479941 UBXN2AP68543 259 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
ATG4B-219ENST00000479941 SH3TC2Q8TF17 1288 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 PIGSQ96S52 555 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-219ENST00000479941 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-219ENST00000479941 PFASO15067 1338 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 PGK2P07205 417 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 ZNF792Q3KQV3 632 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 USH1GQ495M9 461 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 MUM1L1Q5H9M0 696 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 OLFML2BQ68BL8 750 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 NPLOC4Q8TAT6 608 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 TRIB2Q92519 343 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 RRP36Q96EU6 259 aaKnown RBP12.55□□□□□ -0.4
ATG4B-219ENST00000479941 ZNF274Q96GC6 653 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-219ENST00000479941 A1CFQ9NQ94 594 aaKnown RBP12.55□□□□□ -0.4
ATG4B-219ENST00000479941 SEC63Q9UGP8 760 aaKnown RBP12.55□□□□□ -0.4
ATG4B-219ENST00000479941 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
ATG4B-219ENST00000479941 NID2Q14112 1375 aa12.55□□□□□ -0.4
ATG4B-219ENST00000479941 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 NFIBO00712 420 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 INHAP05111 366 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 PDIA3P30101 505 aaKnown RBP12.54□□□□□ -0.4
ATG4B-219ENST00000479941 NEK4P51957 841 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 CCL14Q16627 93 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 NSMFQ6X4W1 530 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 MCF2L2Q86YR7 1114 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
ATG4B-219ENST00000479941 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 MSL3Q8N5Y2 521 aaKnown RBP12.54□□□□□ -0.4
ATG4B-219ENST00000479941 CLEC4DQ8WXI8 215 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 MAML3Q96JK9 1138 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 BACH2Q9BYV9 841 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-219ENST00000479941 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
ATG4B-219ENST00000479941 BAZ2BQ9UIF8 2168 aaKnown RBP12.54□□□□□ -0.4
ATG4B-219ENST00000479941 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 PPP1R11O60927 126 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-219ENST00000479941 IGHA2P01877 340 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 TAL1P17542 331 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-219ENST00000479941 CDC27P30260 824 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 ADD1P35611 737 aaKnown RBP12.53□□□□□ -0.4
ATG4B-219ENST00000479941 AK2P54819 239 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 RNF207Q6ZRF8 634 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 ZNF467Q7Z7K2 595 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-219ENST00000479941 SAMD3Q8N6K7 520 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 FAM133AQ8N9E0 248 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 IL27Q8NEV9 243 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
ATG4B-219ENST00000479941 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.4
ATG4B-219ENST00000479941 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.4
ATG4B-219ENST00000479941 CCDC85CA6NKD9 419 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.41
ATG4B-219ENST00000479941 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
ATG4B-219ENST00000479941 FUT2Q10981 343 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 BAATQ14032 418 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-219ENST00000479941 MAP3K21Q5TCX8 1036 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 KIF2CQ99661 725 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 MAP3K20Q9NYL2 800 aaKnown RBP12.52□□□□□ -0.41
ATG4B-219ENST00000479941 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
ATG4B-219ENST00000479941 RPTORQ8N122 1335 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.41
ATG4B-219ENST00000479941 MYH6P13533 1939 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 LOC102724159A0A0B4J2E5 919 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 ASB14A6NK59 587 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 hCG_1984214I3L0E3 225 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CCL5P13501 91 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 IFNAR1P17181 557 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CALML3P27482 149 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CYP2C19P33261 490 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 GHRHRQ02643 423 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-219ENST00000479941 TRIM32Q13049 653 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 PWP2Q15269 919 aaKnown RBP12.51□□□□□ -0.41
ATG4B-219ENST00000479941 MTFR1Q15390 333 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
ATG4B-219ENST00000479941 ZNF713Q8N859 430 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-219ENST00000479941 TBC1D32Q96NH3 1257 aa12.51□□□□□ -0.41
ATG4B-219ENST00000479941 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms