RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ST3GAL2Q16842 350 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 BBS9Q3SYG4 887 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SV2CQ496J9 727 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SPECC1Q5M775 1068 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 TMEM214Q6NUQ4 689 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 KIAA1211LQ6NV74 962 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 LDHAL6AQ6ZMR3 332 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ARMCX6Q7L4S7 300 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CCNJLQ8IV13 435 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 COLGALT2Q8IYK4 626 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 C16orf71Q8IYS4 520 aaPredicted RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CEP120Q8N960 986 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 RHBDD1Q8TEB9 315 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PARD3BQ8TEW8 1205 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SECISBP2LQ93073 1101 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 HSPBAP1Q96EW2 488 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CCDC138Q96M89 665 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 CDK15Q96Q40 435 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ZSCAN10Q96SZ4 725 aaPredicted RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SLC6A16Q9GZN6 736 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 MCOLN1Q9GZU1 580 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 MTFR1LQ9H019 292 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 FAM204AQ9H8W3 233 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 AGO4Q9HCK5 861 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ARFGAP3Q9NP61 516 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 NMRK2Q9NPI5 230 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SEC31BQ9NQW1 1179 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 TMEM39AQ9NV64 488 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 PGPEP1Q9NXJ5 209 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 LRP2BPQ9P2M1 347 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 METRNQ9UJH8 293 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ODF2LQ9ULJ1 636 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ZBTB21Q9ULJ3 1066 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 TPCN1Q9ULQ1 816 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 ZNF652Q9Y2D9 606 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 TNPO3Q9Y5L0 923 aaKnown RBP3.41□□□□□ -1.86
HMGN4-202ENST00000477243 SLC4A7Q9Y6M7 1214 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 FGD5Q6ZNL6 1462 aa3.41□□□□□ -1.86
HMGN4-202ENST00000477243 MKI67P46013 3256 aaKnown RBP3.4□□□□□ -1.86
HMGN4-202ENST00000477243 WIZO95785 1651 aa3.4□□□□□ -1.86
HMGN4-202ENST00000477243 A0A1W2PQU0 124 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TRIM75PA6NK02 468 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 UPK3BL1B0FP48 263 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 UPK3BL2E5RIL1 263 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 MAFKO60675 156 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 KPNA6O60684 536 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TMCC2O75069 709 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 DNAJC8O75937 253 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 MTA2O94776 668 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 IL33O95760 270 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HRGP04196 525 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NTRK1P04629 796 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 JMJD7P0C870 316 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 FGFR1P11362 822 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HOXB1P14653 301 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 RHCEP18577 417 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ITPKAP23677 461 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 AKAP5P24588 427 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ALDH5A1P51649 535 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 CLNS1AP54105 237 aaKnown RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 OCRLQ01968 901 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 RHDQ02161 417 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 APBA1Q02410 837 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 IFIT5Q13325 482 aaKnown RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 KLF1Q13351 362 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 LAMC2Q13753 1193 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ARID5BQ14865 1188 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 GNPTABQ3T906 1256 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 GNASQ5JWF2 1037 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 SPATA1Q5VX52 437 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 PEAR1Q5VY43 1037 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HEATR6Q6AI08 1181 aaKnown RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NSMFQ6X4W1 530 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 UNC5AQ6ZN44 842 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 C1orf122Q6ZSJ8 110 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NRKQ7Z2Y5 1582 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 BTLAQ7Z6A9 289 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NBPF11Q86T75 865 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 CCDC116Q8IYX3 515 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ZNF295-AS1Q8N0V1 137 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NKAIN3Q8N8D7 197 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 KIAA1958Q8N8K9 716 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ANKK1Q8NFD2 765 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 SLC35G2Q8TBE7 412 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 COG1Q8WTW3 980 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 FRS2Q8WU20 508 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 BTN2A2Q8WVV5 523 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TMEM40Q8WWA1 233 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ATRIPQ8WXE1 791 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 RSPH1Q8WYR4 309 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 HDAC2Q92769 488 aaKnown RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 FAXDC2Q96IV6 333 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 WNK4Q96J92 1243 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 CDHR1Q96JP9 859 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 MAGEB10Q96LZ2 347 aaPredicted RBP3.4□□□□□ -1.87
HMGN4-202ENST00000477243 TCF12Q99081 682 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 ORAI3Q9BRQ5 295 aa3.4□□□□□ -1.87
HMGN4-202ENST00000477243 NAA15Q9BXJ9 866 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms