RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 MAML3Q96JK9 1138 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 PIGSQ96S52 555 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 AMNQ9BXJ7 453 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 MAF1Q9H063 256 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
SMIM4-202ENST00000476842 A1CFQ9NQ94 594 aaKnown RBP20.67■□□□□ 0.9
SMIM4-202ENST00000476842 PDRG1Q9NUG6 133 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 RBM28Q9NW13 759 aaKnown RBP20.67■□□□□ 0.9
SMIM4-202ENST00000476842 FLRT1Q9NZU1 646 aa20.67■□□□□ 0.9
SMIM4-202ENST00000476842 DOCK3Q8IZD9 2030 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 PNMA6FA0A0J9YX94 578 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 PLEKHA8P1O95397 391 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
SMIM4-202ENST00000476842 TRAF1Q13077 416 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 TOB2Q14106 344 aaPredicted RBP20.66■□□□□ 0.9
SMIM4-202ENST00000476842 MTFR1Q15390 333 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 RGS22Q8NE09 1264 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 PFASO15067 1338 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 ABCB11O95342 1321 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 PLXNB2O15031 1838 aa20.66■□□□□ 0.9
SMIM4-202ENST00000476842 TRIM32Q13049 653 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 RTN1Q16799 776 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 USH1GQ495M9 461 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 MAP3K21Q5TCX8 1036 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 MFSD14CQ5VZR4 134 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 TMTC3Q6ZXV5 915 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 FAM217BQ9NTX9 383 aaPredicted RBP20.65■□□□□ 0.9
SMIM4-202ENST00000476842 CYP39A1Q9NYL5 469 aa20.65■□□□□ 0.9
SMIM4-202ENST00000476842 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
SMIM4-202ENST00000476842 GOLGA8AA7E2F4 631 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 GOLGA8BA8MQT2 603 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 POTEB2H3BUK9 544 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 NFIBO00712 420 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 CCL5P13501 91 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 CACNB2Q08289 660 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 NSMFQ6X4W1 530 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 ZNF467Q7Z7K2 595 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 HOMER1Q86YM7 354 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 CMTR1Q8N1G2 835 aaKnown RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 FAM133AQ8N9E0 248 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 RRP36Q96EU6 259 aaKnown RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
SMIM4-202ENST00000476842 NAP1L2Q9ULW6 460 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-202ENST00000476842 RPTORQ8N122 1335 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 CCDC196A0A1B0GTZ2 297 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 MYCP01106 439 aaPredicted RBP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 CYP2C19P33261 490 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 METAP2P50579 478 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 BAATQ14032 418 aaPredicted RBP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 MSL3Q8N5Y2 521 aaKnown RBP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 ZNF274Q96GC6 653 aaPredicted RBP20.63■□□□□ 0.89
SMIM4-202ENST00000476842 TINF2Q9BSI4 451 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 C22orf23Q9BZE7 217 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 UNC93B1Q9H1C4 597 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 PCDHA1Q9Y5I3 950 aa20.63■□□□□ 0.89
SMIM4-202ENST00000476842 ZNF236Q9UL36 1845 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 PRKAR2AP13861 404 aaKnown RBP20.62■□□□□ 0.89
SMIM4-202ENST00000476842 CDC27P30260 824 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 ADD1P35611 737 aaKnown RBP20.62■□□□□ 0.89
SMIM4-202ENST00000476842 CNTN2Q02246 1040 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 FUT2Q10981 343 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 MAMDC4Q6UXC1 1216 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 RNF207Q6ZRF8 634 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 MCF2L2Q86YR7 1114 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 RNF208Q9H0X6 261 aa20.62■□□□□ 0.89
SMIM4-202ENST00000476842 HMX1Q9NP08 348 aaPredicted RBP20.62■□□□□ 0.89
SMIM4-202ENST00000476842 NID2Q14112 1375 aa20.61■□□□□ 0.89
SMIM4-202ENST00000476842 RBM25P49756 843 aaKnown RBP20.61■□□□□ 0.89
SMIM4-202ENST00000476842 PIBF1Q8WXW3 757 aa20.61■□□□□ 0.89
SMIM4-202ENST00000476842 FGD4Q96M96 766 aa20.61■□□□□ 0.89
SMIM4-202ENST00000476842 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
SMIM4-202ENST00000476842 PTPDC1A2A3K4 754 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 SOWAHBA6NEL2 793 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 GJB1P08034 283 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 RPS6P62753 249 aaKnown RBP20.6■□□□□ 0.89
SMIM4-202ENST00000476842 ANKRD1Q15327 319 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 TBC1D5Q92609 795 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 UPF2Q9HAU5 1272 aaKnown RBP20.6■□□□□ 0.89
SMIM4-202ENST00000476842 PAK6Q9NQU5 681 aaPredicted RBP20.6■□□□□ 0.89
SMIM4-202ENST00000476842 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
SMIM4-202ENST00000476842 SYNGAP1Q96PV0 1343 aa20.59■□□□□ 0.89
SMIM4-202ENST00000476842 CALML3P27482 149 aa20.59■□□□□ 0.89
SMIM4-202ENST00000476842 NEK4P51957 841 aa20.59■□□□□ 0.89
SMIM4-202ENST00000476842 SAMD3Q8N6K7 520 aa20.59■□□□□ 0.89
SMIM4-202ENST00000476842 LARP6Q9BRS8 491 aaKnown RBP20.59■□□□□ 0.89
SMIM4-202ENST00000476842 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMIM4-202ENST00000476842 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
SMIM4-202ENST00000476842 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
SMIM4-202ENST00000476842 V9GY48 417 aaPredicted RBP20.59■□□□□ 0.89
SMIM4-202ENST00000476842 CENPFP49454 3210 aa20.59■□□□□ 0.89
SMIM4-202ENST00000476842 ASB14A6NK59 587 aa20.58■□□□□ 0.89
SMIM4-202ENST00000476842 OPLAHO14841 1288 aa20.58■□□□□ 0.89
SMIM4-202ENST00000476842 CAPN15O75808 1086 aa20.58■□□□□ 0.89
SMIM4-202ENST00000476842 CYBAP13498 195 aa20.58■□□□□ 0.89
SMIM4-202ENST00000476842 CAPN2P17655 700 aa20.58■□□□□ 0.89
SMIM4-202ENST00000476842 CCND3P30281 292 aaPredicted RBP20.58■□□□□ 0.89
SMIM4-202ENST00000476842 AK2P54819 239 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms