RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 DPYSL4O14531 572 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 ASAP2O43150 1006 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CTNND1O60716 968 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TAF5LO75529 589 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 RAD17O75943 681 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CABYRO75952 493 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 SCG2P13521 617 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 HADHQ16836 314 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 ZBTB33Q86T24 672 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 RAB3IL1Q8TBN0 382 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FAM212AQ96EL1 285 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 WRNIP1Q96S55 665 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FAM114A2Q9NRY5 505 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 PNMA6FA0A0J9YX94 578 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CPT1AP50416 773 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TIMM10P62072 90 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 MAP2K1Q02750 393 aaPredicted RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 PSMD2Q13200 908 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 VEPH1Q14D04 833 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 XKR9Q5GH70 373 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 LGSNQ5TDP6 509 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CEP135Q66GS9 1140 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 KLHL10Q6JEL2 608 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 MIGA2Q7L4E1 593 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 UBL4BQ8N7F7 174 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 RDM1Q8NG50 284 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 ZKSCAN3Q9BRR0 538 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 IQCGQ9H095 443 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 GREM2Q9H772 168 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FAM204AQ9H8W3 233 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 INCENPQ9NQS7 918 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TRIM35Q9UPQ4 493 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 V9GYY5 206 aaPredicted RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 USP42Q9H9J4 1324 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 PXDNLA1KZ92 1463 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 PDS5AQ29RF7 1337 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 B4E1Z4 1266 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 SGSM2O43147 1006 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CA4P22748 312 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 XPAP23025 273 aaPredicted RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TNNC1P63316 161 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 TBC1D8BQ0IIM8 1120 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 EIF2B5Q13144 721 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 ALX1Q15699 326 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 ERCC6LQ2NKX8 1250 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FKBP1CQ5VVH2 108 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 RNF207Q6ZRF8 634 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 C7orf31Q8N865 590 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 DPF2Q92785 391 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FTOQ9C0B1 505 aaKnown RBP eCLIP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 MROH8Q9H579 483 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 DBNDD1Q9H9R9 158 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 MTRF1LQ9UGC7 380 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 STAP2Q9UGK3 403 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 CNOT7Q9UIV1 285 aaKnown RBP5.11□□□□□ -1.59
CCNL1-215ENST00000474539 FAN1Q9Y2M0 1017 aa5.11□□□□□ -1.59
CCNL1-215ENST00000474539 PPRC1Q5VV67 1664 aaKnown RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 TMCO5BA8MYB1 307 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 CXCL11O14625 94 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 SART1O43290 800 aaKnown RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 PARNO95453 639 aaKnown RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 OR52Z1P0C646 297 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 SMARCA1P28370 1054 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 PDE6CP51160 858 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 MTX1Q13505 466 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 NFIXQ14938 502 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 PPP4R3CPQ6ZMV5 832 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 EP400NLQ6ZTU2 488 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 CABP7Q86V35 215 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 MYCT1Q8N699 235 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 CEP112Q8N8E3 955 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 SH3TC2Q8TF17 1288 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 RABGGTAQ92696 567 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 ACCSQ96QU6 501 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 CRACR2AQ9BSW2 395 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 C1orf112Q9NSG2 853 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 PCDHA12Q9UN75 941 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 QRICH2Q9H0J4 1663 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 GTPBP6O43824 516 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 EXOC3O60645 756 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 EFCAB14O75071 495 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 GNRH1P01148 92 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 TNFAIP3P21580 790 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 MCM7P33993 719 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 ADD2P35612 726 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 GYG1P46976 350 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 PTPAQ15257 358 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 ZYXQ15942 572 aaKnown RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 MTERF2Q49AM1 385 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 ZMYM1Q5SVZ6 1142 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 ERO1BQ86YB8 467 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 MAP7D3Q8IWC1 876 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 METTL13Q8N6R0 699 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 FAM20AQ96MK3 541 aa5.1□□□□□ -1.59
CCNL1-215ENST00000474539 GCOM2Q9BZD3 368 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 FARP1Q9Y4F1 1045 aaPredicted RBP5.1□□□□□ -1.59
CCNL1-215ENST00000474539 KIDINS220Q9ULH0 1771 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms