RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
CD46-213ENST00000471987 ZDHHC15Q96MV8 337 aa8.01□□□□□ -1.13
CD46-213ENST00000471987 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.01□□□□□ -1.13
CD46-213ENST00000471987 A0A1W2PQJ5 194 aa8□□□□□ -1.13
CD46-213ENST00000471987 IRS4O14654 1257 aaPredicted RBP8□□□□□ -1.13
CD46-213ENST00000471987 TBC1D8O95759 1140 aa8□□□□□ -1.13
CD46-213ENST00000471987 CD3EP07766 207 aa8□□□□□ -1.13
CD46-213ENST00000471987 BMP7P18075 431 aa8□□□□□ -1.13
CD46-213ENST00000471987 GJA8P48165 433 aa8□□□□□ -1.13
CD46-213ENST00000471987 RPTNQ6XPR3 784 aa8□□□□□ -1.13
CD46-213ENST00000471987 HOMEZQ8IX15 550 aa8□□□□□ -1.13
CD46-213ENST00000471987 MRRFQ96E11 262 aaKnown RBP8□□□□□ -1.13
CD46-213ENST00000471987 PTCHD1Q96NR3 888 aa8□□□□□ -1.13
CD46-213ENST00000471987 GBP3Q9H0R5 595 aa8□□□□□ -1.13
CD46-213ENST00000471987 PARD6AQ9NPB6 346 aa8□□□□□ -1.13
CD46-213ENST00000471987 MAPKAPK2P49137 400 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 CORO7P57737 925 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 HDLBPQ00341 1268 aaKnown RBP7.99□□□□□ -1.13
CD46-213ENST00000471987 SLC7A5Q01650 507 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 HEATR6Q6AI08 1181 aaKnown RBP7.99□□□□□ -1.13
CD46-213ENST00000471987 PANK1Q8TE04 598 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 DACT3Q96B18 629 aaPredicted RBP7.99□□□□□ -1.13
CD46-213ENST00000471987 ZCCHC4Q9H5U6 513 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 PDLIM7Q9NR12 457 aa7.99□□□□□ -1.13
CD46-213ENST00000471987 A0A1W2PQH9 124 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 MSL3P1P0C860 447 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 IFNGR1P15260 489 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 AFF3P51826 1226 aaKnown RBP7.98□□□□□ -1.13
CD46-213ENST00000471987 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 PLEKHN1Q494U1 663 aaPredicted RBP7.98□□□□□ -1.13
CD46-213ENST00000471987 ZC3H14Q6PJT7 736 aaKnown RBP7.98□□□□□ -1.13
CD46-213ENST00000471987 IGDCC3Q8IVU1 814 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 KLHL25Q9H0H3 589 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 PCDHA5Q9Y5H7 936 aa7.98□□□□□ -1.13
CD46-213ENST00000471987 KRTAP9-7A8MTY7 169 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 SRGAP3O43295 1099 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 PPM1BO75688 479 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 CYBBP04839 570 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 L1CAMP32004 1257 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 CTSWP56202 376 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 EEF1DP3Q658K8 133 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 BICRALQ6AI39 1079 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 RCSD1Q6JBY9 416 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 CNKSR3Q6P9H4 555 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 PAQR3Q6TCH7 311 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 ADAT2Q7Z6V5 191 aaKnown RBP7.97□□□□□ -1.13
CD46-213ENST00000471987 ADCY4Q8NFM4 1077 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 NLGN2Q8NFZ4 835 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 CPLX3Q8WVH0 158 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 KCNC2Q96PR1 638 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 EPB41L4AQ9HCS5 686 aaPredicted RBP7.97□□□□□ -1.13
CD46-213ENST00000471987 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
CD46-213ENST00000471987 DBHP09172 617 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 HOXA5P20719 270 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 NASPP49321 788 aaPredicted RBP7.96□□□□□ -1.14
CD46-213ENST00000471987 PPP2R5EQ16537 467 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 C9orf131Q5VYM1 1079 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 FAM129CQ86XR2 697 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 TMEFF1Q8IYR6 380 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 MARCH10Q8NA82 808 aaPredicted RBP7.96□□□□□ -1.14
CD46-213ENST00000471987 SEC16BQ96JE7 1060 aa7.96□□□□□ -1.14
CD46-213ENST00000471987 BUB1BO60566 1050 aaPredicted RBP7.95□□□□□ -1.14
CD46-213ENST00000471987 TRIM13O60858 407 aa7.95□□□□□ -1.14
CD46-213ENST00000471987 EPHX1P07099 455 aa7.95□□□□□ -1.14
CD46-213ENST00000471987 SHDQ96IW2 340 aa7.95□□□□□ -1.14
CD46-213ENST00000471987 AURKAO14965 403 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 PFKLP17858 780 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 NCKAP1LP55160 1127 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 CASP7P55210 303 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 ZNF200P98182 395 aaPredicted RBP7.94□□□□□ -1.14
CD46-213ENST00000471987 KLHL6Q8WZ60 621 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 RCC1LQ96I51 464 aaKnown RBP7.94□□□□□ -1.14
CD46-213ENST00000471987 FGD4Q96M96 766 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 TGIF2Q9GZN2 237 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 CGGBP1Q9UFW8 167 aaPredicted RBP7.94□□□□□ -1.14
CD46-213ENST00000471987 IRS2Q9Y4H2 1338 aa7.94□□□□□ -1.14
CD46-213ENST00000471987 STXBP3O00186 592 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 SASH1O94885 1247 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 TACR1P25103 407 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 SEPHS1P49903 392 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 AMPD2Q01433 879 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 GRB10Q13322 594 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 TARBP2Q15633 366 aaKnown RBP7.93□□□□□ -1.14
CD46-213ENST00000471987 ARHGEF39Q8N4T4 335 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 PWWP2AQ96N64 755 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 KIAA1522Q9P206 1035 aaPredicted RBP7.93□□□□□ -1.14
CD46-213ENST00000471987 STRIP2Q9ULQ0 834 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 SUGT1Q9Y2Z0 365 aa7.93□□□□□ -1.14
CD46-213ENST00000471987 VAMP4O75379 141 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 RBM10P98175 930 aaKnown RBP7.92□□□□□ -1.14
CD46-213ENST00000471987 DPY19L1Q2PZI1 675 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 C20orf173Q96LM9 149 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 MCMBPQ9BTE3 642 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 DBR1Q9UK59 544 aaKnown RBP7.92□□□□□ -1.14
CD46-213ENST00000471987 INPP5FQ9Y2H2 1132 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 BACE2Q9Y5Z0 518 aa7.92□□□□□ -1.14
CD46-213ENST00000471987 ANKRD34BA5PLL1 514 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 C2orf71A6NGG8 1288 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 B8ZZF3 427 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 F8W031 263 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms