RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FBXO11Q86XK2 927 aa8.27□□□□□ -1.09
HDAC3-206ENST00000471968 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
HDAC3-206ENST00000471968 ZGPATQ8N5A5 531 aaKnown RBP8.27□□□□□ -1.09
HDAC3-206ENST00000471968 KDF1Q8NAX2 398 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-206ENST00000471968 DMXL2Q8TDJ6 3036 aa8.27□□□□□ -1.09
HDAC3-206ENST00000471968 PTPN13Q12923 2485 aa8.27□□□□□ -1.09
HDAC3-206ENST00000471968 PITPNM1O00562 1244 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 RHBDL3P58872 404 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 COG2Q14746 738 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 METTL24Q5JXM2 366 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 N4BP2L1Q5TBK1 243 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-206ENST00000471968 NOL8Q76FK4 1167 aaKnown RBP8.26□□□□□ -1.09
HDAC3-206ENST00000471968 ADAM32Q8TC27 787 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 KIF12Q96FN5 646 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 MYH16Q9H6N6 1097 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 DNAJC18Q9H819 358 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 HOXC10Q9NYD6 342 aa8.26□□□□□ -1.09
HDAC3-206ENST00000471968 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
HDAC3-206ENST00000471968 ANKRD17O75179 2603 aaKnown RBP8.26□□□□□ -1.09
HDAC3-206ENST00000471968 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
HDAC3-206ENST00000471968 RBAK-RBAKDNI3L0D1 243 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 SLC30A4O14863 429 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 GRM6O15303 877 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 KINO60870 393 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 NPM3O75607 178 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 GH2P01242 217 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 NPR3P17342 541 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 ATF7P17544 494 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 LMOD3Q0VAK6 560 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 FSCN1Q16658 493 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 TCTN1Q2MV58 587 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 CNKSR3Q6P9H4 555 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 DZIP1Q86YF9 867 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 MSL3Q8N5Y2 521 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 SP7Q8TDD2 431 aaPredicted RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 SECISBP2LQ93073 1101 aaKnown RBP8.25□□□□□ -1.09
HDAC3-206ENST00000471968 RTP3Q9BQQ7 232 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 TRIM34Q9BYJ4 488 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 GINM1Q9NU53 330 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 PI4KBQ9UBF8 816 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 ASTN1O14525 1302 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 SALL1Q9NSC2 1324 aa8.25□□□□□ -1.09
HDAC3-206ENST00000471968 ABHD14A-ACY1A0A1B0GW23 586 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 EIF4E1BA6NMX2 242 aaKnown RBP8.24□□□□□ -1.09
HDAC3-206ENST00000471968 ZEB2O60315 1214 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 PDE8BO95263 885 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 IFIT1P09914 478 aaKnown RBP8.24□□□□□ -1.09
HDAC3-206ENST00000471968 SP9P0CG40 484 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 PTGS1P23219 599 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 NKX3-2P78367 333 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 FAM47CQ5HY64 1035 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 MB21D1Q8N884 522 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 ACER1Q8TDN7 264 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 KIAA1683Q9H0B3 1180 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 TSHZ2Q9NRE2 1034 aa8.24□□□□□ -1.09
HDAC3-206ENST00000471968 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.24□□□□□ -1.09
HDAC3-206ENST00000471968 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 MYH2Q9UKX2 1941 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-206ENST00000471968 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-206ENST00000471968 SLC25A27O95847 323 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 SMPD1P17405 629 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 PPP2R1AP30153 589 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 CTNNB1P35222 781 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 HTRA4P83105 476 aaPredicted RBP8.23□□□□□ -1.09
HDAC3-206ENST00000471968 BFSP2Q13515 415 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 GPNMBQ14956 572 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 RAB3GAP1Q15042 981 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 LRRC24Q50LG9 513 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.23□□□□□ -1.09
HDAC3-206ENST00000471968 TLK2Q86UE8 772 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 MYOCDQ8IZQ8 938 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 NETO1Q8TDF5 533 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 PPP1R13LQ8WUF5 828 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 SUSD6Q92537 303 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 ATG4CQ96DT6 458 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 LMAN2LQ9H0V9 348 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 ABHD16BQ9H3Z7 469 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 MROH7-TTC4A0A0A0MT08 1334 aa8.23□□□□□ -1.09
HDAC3-206ENST00000471968 DYNC1LI2O43237 492 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 EFCAB14O75071 495 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 KRT38O76015 456 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 ASGR2P07307 311 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 TGM1P22735 817 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 TNFAIP2Q03169 654 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 IKBKEQ14164 716 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 LRRFIP1Q32MZ4 808 aaKnown RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 MAMDC4Q6UXC1 1216 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 EFHBQ8N7U6 833 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 VGLL2Q8N8G2 317 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 FAM163AQ96GL9 167 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-206ENST00000471968 AP5M1Q9H0R1 490 aa8.22□□□□□ -1.09
HDAC3-206ENST00000471968 PNNQ9H307 717 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms