RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 SYTL5Q8TDW5 730 aaPredicted RBP5.85□□□□□ -1.47
TTC3-213ENST00000469939 HDAC8Q9BY41 377 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 PRDM14Q9GZV8 571 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 GEMIN8Q9NWZ8 242 aaKnown RBP5.85□□□□□ -1.47
TTC3-213ENST00000469939 SLAMF8Q9P0V8 285 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 PCDHB10Q9UN67 800 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 CTNND2Q9UQB3 1225 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 PCDHA11Q9Y5I1 949 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 SLC12A7Q9Y666 1083 aa5.85□□□□□ -1.47
TTC3-213ENST00000469939 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 C9IYK1 514 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 SIGLEC6O43699 453 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 SUSD5O60279 629 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 GDNFP39905 211 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 NFKB2Q00653 900 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 AUHQ13825 339 aaKnown RBP5.84□□□□□ -1.47
TTC3-213ENST00000469939 FAM50AQ14320 339 aaKnown RBP5.84□□□□□ -1.47
TTC3-213ENST00000469939 ZC3H12BQ5HYM0 836 aaKnown RBP5.84□□□□□ -1.47
TTC3-213ENST00000469939 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 UBR7Q8N806 425 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 PMM1Q92871 262 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 SMARCC1Q92922 1105 aaPredicted RBP5.84□□□□□ -1.47
TTC3-213ENST00000469939 C8orf48Q96LL4 319 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 C19orf73Q9NVV2 129 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 PCDHB12Q9Y5F1 795 aa5.84□□□□□ -1.47
TTC3-213ENST00000469939 CCDC163A0A0D9SF12 145 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PRC1O43663 620 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PDE8AO60658 829 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PRAMEF1O95521 474 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PMLP29590 882 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 L1CAMP32004 1257 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 SOX5P35711 763 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 BBS9Q3SYG4 887 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 TDRD10Q5VZ19 366 aaKnown RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 KIAA1211LQ6NV74 962 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 RNF180Q86T96 592 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PPFIBP1Q86W92 1011 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 C7orf61Q8IZ16 206 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 LRRC47Q8N1G4 583 aaKnown RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 ZNF655Q8N720 491 aaPredicted RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 POU5F2Q8N7G0 328 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 KLHL6Q8WZ60 621 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 TSR2Q969E8 191 aaKnown RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 SYTL4Q96C24 671 aaPredicted RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 TCTN2Q96GX1 697 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 EXOC2Q96KP1 924 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 EPN3Q9H201 632 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 PHAXQ9H814 394 aaKnown RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 TCEAL9Q9UHQ7 104 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 TMEM59LQ9UK28 342 aa5.83□□□□□ -1.48
TTC3-213ENST00000469939 ZNF214Q9UL59 606 aaPredicted RBP5.83□□□□□ -1.48
TTC3-213ENST00000469939 WASHC2CQ9Y4E1 1318 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 IQCA1LA6NCM1 817 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 ALG1L2C9J202 215 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 RAPGEF3O95398 923 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 TP53P04637 393 aaPredicted RBP5.82□□□□□ -1.48
TTC3-213ENST00000469939 AFMP43652 599 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 CCAR1Q8IX12 1150 aaKnown RBP5.82□□□□□ -1.48
TTC3-213ENST00000469939 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 MORC4Q8TE76 937 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 NCOA5Q9HCD5 579 aaKnown RBP5.82□□□□□ -1.48
TTC3-213ENST00000469939 CHST7Q9NS84 486 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 GFOD1Q9NXC2 390 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 PRR13Q9NZ81 148 aa5.82□□□□□ -1.48
TTC3-213ENST00000469939 PLD2O14939 933 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 SHOXO15266 292 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 ALDH1L1O75891 902 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 HK2P52789 917 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 PCBP3P57721 371 aaKnown RBP5.81□□□□□ -1.48
TTC3-213ENST00000469939 TEKQ02763 1124 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 NFE2Q16621 373 aaPredicted RBP5.81□□□□□ -1.48
TTC3-213ENST00000469939 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 CT47A1Q5JQC4 288 aaPredicted RBP5.81□□□□□ -1.48
TTC3-213ENST00000469939 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 AXDND1Q5T1B0 1012 aaPredicted RBP5.81□□□□□ -1.48
TTC3-213ENST00000469939 DCAF15Q66K64 600 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 RNF111Q6ZNA4 994 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 ZNF526Q8TF50 670 aaPredicted RBP5.81□□□□□ -1.48
TTC3-213ENST00000469939 FAM168AQ92567 244 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 CCDC136Q96JN2 1154 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 CLUHP3Q96NS8 147 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 FAM86C1Q9NVL1 165 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 MCM8Q9UJA3 840 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 TCFL5Q9UL49 500 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 MINPP1Q9UNW1 487 aa5.81□□□□□ -1.48
TTC3-213ENST00000469939 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 MEIS1O00470 390 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 ZGLP1P0C6A0 271 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 RAC2P15153 192 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 RHBDL3P58872 404 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 SLC7A5Q01650 507 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 TTF1Q15361 905 aaPredicted RBP5.8□□□□□ -1.48
TTC3-213ENST00000469939 GNPTABQ3T906 1256 aa5.8□□□□□ -1.48
TTC3-213ENST00000469939 FNDC3BQ53EP0 1204 aaKnown RBP5.8□□□□□ -1.48
TTC3-213ENST00000469939 ZSWIM9Q86XI8 627 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms