RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 NOSTRINQ8IVI9 506 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 ADGRF4Q8IZF3 695 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 ZNF713Q8N859 430 aaPredicted RBP9.41□□□□□ -0.9
RPA3-205ENST00000462723 KLRG1Q96E93 195 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 PIGSQ96S52 555 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 CPVLQ9H3G5 476 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 AS3MTQ9HBK9 375 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 BARHL2Q9NY43 387 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
RPA3-205ENST00000462723 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 POTECB2RU33 542 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 BTBD18B2RXH4 712 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 KIF28PB7ZC32 967 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 TMEM232C9JQI7 657 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 VEGFAP15692 232 aaPredicted RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 SLC16A2P36021 539 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 IREB2P48200 963 aaKnown RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 USP14P54578 494 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 NAPAP54920 295 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 NOL9Q5SY16 702 aaKnown RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 GALNT17Q6IS24 598 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.9
RPA3-205ENST00000462723 CHURC1Q8WUH1 139 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 LPAR1Q92633 364 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
RPA3-205ENST00000462723 ZKSCAN4Q969J2 545 aaPredicted RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 CDCA5Q96FF9 252 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 NUP88Q99567 741 aaPredicted RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 MTRQ99707 1265 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 WDR18Q9BV38 432 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 KIAA1683Q9H0B3 1180 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 JMJD4Q9H9V9 463 aa9.4□□□□□ -0.9
RPA3-205ENST00000462723 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
RPA3-205ENST00000462723 ELP1O95163 1332 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 STXBP3O00186 592 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 ZBTB5O15062 677 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 TRAK2O60296 914 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
RPA3-205ENST00000462723 PTPRAP18433 802 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 GNA11P29992 359 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 STAT2P52630 851 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 TRAF1Q13077 416 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 PRKG1Q13976 671 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
RPA3-205ENST00000462723 FAM83BQ5T0W9 1011 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 SYDE2Q5VT97 1194 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 MYSM1Q5VVJ2 828 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 BTNL9Q6UXG8 535 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 CCDC84Q86UT8 332 aaPredicted RBP9.39□□□□□ -0.91
RPA3-205ENST00000462723 FAM160B2Q86V87 743 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 MTMR8Q96EF0 704 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 GLIS2Q9BZE0 524 aaPredicted RBP9.39□□□□□ -0.91
RPA3-205ENST00000462723 GDPD2Q9HCC8 539 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 C6orf50Q9HD87 102 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 LMBRD1Q9NUN5 540 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 PCDHA4Q9UN74 947 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 CSADQ9Y600 493 aa9.39□□□□□ -0.91
RPA3-205ENST00000462723 ESYT2A0FGR8 921 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 GOLGA6L4A6NEF3 574 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 PLA2G6O60733 806 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 MBD3O95983 291 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 SPP2Q13103 211 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 NR5A1Q13285 461 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 VGLL4Q14135 290 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 CDC37Q16543 378 aaPredicted RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 QRICH1Q2TAL8 776 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 KIAA1755Q5JYT7 1200 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 GPIHBP1Q8IV16 184 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 BLIDQ8IZY5 108 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 LEO1Q8WVC0 666 aaPredicted RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 SHISA4Q96DD7 197 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 ZMYND12Q9H0C1 365 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 RRAGCQ9HB90 399 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 RTEL1Q9NZ71 1219 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 FEM1BQ9UK73 627 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 NOL7Q9UMY1 257 aaKnown RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 FZD1Q9UP38 647 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 DDX49Q9Y6V7 483 aaKnown RBP9.38□□□□□ -0.91
RPA3-205ENST00000462723 ZHX2Q9Y6X8 837 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
RPA3-205ENST00000462723 PAPPA2Q9BXP8 1791 aa9.37□□□□□ -0.91
RPA3-205ENST00000462723 OTOFQ9HC10 1997 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms