RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ARMCX2Q7L311 632 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 RASGRP2Q7LDG7 609 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 FAM126BQ8IXS8 530 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 GMCL1P1Q8NEA9 526 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 KIFC2Q96AC6 838 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 EVI5LQ96CN4 794 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 DDX11Q96FC9 970 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 MKNK2Q9HBH9 465 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 CLIP2Q9UDT6 1046 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 SYNPO2Q9UMS6 1093 aa9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 TRIP12Q14669 1992 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPA-210ENST00000462553 TCF20Q9UGU0 1960 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 MROH7Q68CQ1 1323 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 A0A0D9SFI3 127 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 DCDC2CA8MYV0 355 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 GSPT1P15170 499 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 PTGS1P23219 599 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 CNTN2Q02246 1040 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 TMEM240Q5SV17 173 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 MFSD5Q6N075 450 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 FAM133AQ8N9E0 248 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 CHST13Q8NET6 341 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 FAM227BQ96M60 508 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 GLT1D1Q96MS3 346 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 ABHD16BQ9H3Z7 469 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 A1CFQ9NQ94 594 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 BMP2KQ9NSY1 1161 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 DDX49Q9Y6V7 483 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 KIAA1217Q5T5P2 1943 aa9.41□□□□□ -0.9
CDC42BPA-210ENST00000462553 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 A0A0U1RQG5 324 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 SOWAHBA6NEL2 793 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 GRXCR1A8MXD5 290 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 ARVCFO00192 962 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZBED4O75132 1171 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 TTLL1O95922 423 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 CD4P01730 458 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 BMP3P12645 472 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 CSF2RAP15509 400 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 PBX2P40425 430 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 TDO2P48775 406 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 LRRFIP1Q32MZ4 808 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 VPS53Q5VIR6 699 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZNF589Q86UQ0 364 aaPredicted RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 IFNL3Q8IZI9 196 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 ANKRD35Q8N283 1001 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 NEDD1Q8NHV4 660 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 TIFAQ96CG3 184 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 PBX4Q9BYU1 374 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 ZNF576Q9H609 170 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 HOMER2Q9NSB8 354 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 FBXO40Q9UH90 709 aa9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 GNEQ9Y223 722 aaKnown RBP9.4□□□□□ -0.9
CDC42BPA-210ENST00000462553 GRIN2DO15399 1336 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 UMODL1Q5DID0 1318 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 TMEM232C9JQI7 657 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 ACRP10323 421 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 GNAT2P19087 354 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 BEX3Q00994 111 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 NMIQ13287 307 aaPredicted RBP9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 PPIGQ13427 754 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 SLFN13Q68D06 897 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 SLC43A3Q8NBI5 491 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 PCSK9Q8NBP7 692 aaKnown RBP9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 VWCEQ96DN2 955 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 AGBL1Q96MI9 1066 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 ACAD9Q9H845 621 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 RNF146Q9NTX7 359 aa9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC42BPA-210ENST00000462553 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 CYP2C18P33260 490 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 STAT2P52630 851 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 PPARAQ07869 468 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 MUM1L1Q5H9M0 696 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 TMEM63BQ5T3F8 832 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 PSRC1Q6PGN9 363 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 ZNF365Q70YC5 407 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 TLK2Q86UE8 772 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 ZNF444Q8N0Y2 327 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 RILPL2Q969X0 211 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 IL25Q9H293 177 aa9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 HELLSQ9NRZ9 838 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms