RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 WDR19Q8NEZ3 1342 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 NFIBO00712 420 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 ADCY6O43306 1168 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 CYP21A2P08686 494 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 BMP8BP34820 402 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 CCDC144BQ3MJ40 725 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 FERMT2Q96AC1 680 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 PNMA2Q9UL42 364 aa22.17■■□□□ 1.14
COL5A1-203ENST00000460264 U3KPZ7 1027 aaPredicted RBP22.17■■□□□ 1.14
COL5A1-203ENST00000460264 ASB14A6NK59 587 aa22.16■■□□□ 1.14
COL5A1-203ENST00000460264 DUSP11O75319 330 aaKnown RBP22.16■■□□□ 1.14
COL5A1-203ENST00000460264 CYB5R4Q7L1T6 521 aa22.16■■□□□ 1.14
COL5A1-203ENST00000460264 CPVLQ9H3G5 476 aa22.16■■□□□ 1.14
COL5A1-203ENST00000460264 ATP11BQ9Y2G3 1177 aa22.16■■□□□ 1.14
COL5A1-203ENST00000460264 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
COL5A1-203ENST00000460264 CLEC4DQ8WXI8 215 aa22.15■■□□□ 1.14
COL5A1-203ENST00000460264 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
COL5A1-203ENST00000460264 UBA5Q9GZZ9 404 aa22.15■■□□□ 1.14
COL5A1-203ENST00000460264 TAF6LQ9Y6J9 622 aa22.15■■□□□ 1.14
COL5A1-203ENST00000460264 DDX49Q9Y6V7 483 aaKnown RBP22.15■■□□□ 1.14
COL5A1-203ENST00000460264 A0A1W2PQ45 241 aaPredicted RBP22.14■■□□□ 1.13
COL5A1-203ENST00000460264 A0A1W2PQY0 241 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 TRDNQ13061 729 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 BAATQ14032 418 aaPredicted RBP22.14■■□□□ 1.13
COL5A1-203ENST00000460264 SEC23AQ15436 765 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 TRIM60Q495X7 471 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 IFIT1BQ5T764 474 aaKnown RBP22.14■■□□□ 1.13
COL5A1-203ENST00000460264 C1orf53Q5VUE5 145 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.13
COL5A1-203ENST00000460264 KLHDC9Q8NEP7 349 aa22.14■■□□□ 1.13
COL5A1-203ENST00000460264 TSEN34Q9BSV6 310 aaKnown RBP22.14■■□□□ 1.13
COL5A1-203ENST00000460264 MYADML2A6NDP7 307 aa22.13■■□□□ 1.13
COL5A1-203ENST00000460264 CST5P28325 142 aaPredicted RBP22.13■■□□□ 1.13
COL5A1-203ENST00000460264 CCSAPQ6IQ19 270 aaPredicted RBP22.13■■□□□ 1.13
COL5A1-203ENST00000460264 SLC30A10Q6XR72 485 aa22.13■■□□□ 1.13
COL5A1-203ENST00000460264 UPF3AQ9H1J1 476 aaKnown RBP22.13■■□□□ 1.13
COL5A1-203ENST00000460264 PTPDC1A2A3K4 754 aa22.12■■□□□ 1.13
COL5A1-203ENST00000460264 PARP1P09874 1014 aaKnown RBP22.12■■□□□ 1.13
COL5A1-203ENST00000460264 ACLYP53396 1101 aa22.12■■□□□ 1.13
COL5A1-203ENST00000460264 IRX5P78411 483 aaPredicted RBP22.12■■□□□ 1.13
COL5A1-203ENST00000460264 CDC37Q16543 378 aaPredicted RBP22.12■■□□□ 1.13
COL5A1-203ENST00000460264 MORC4Q8TE76 937 aa22.12■■□□□ 1.13
COL5A1-203ENST00000460264 MAP4K1Q92918 833 aa22.12■■□□□ 1.13
COL5A1-203ENST00000460264 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 E7EWF7 191 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 C6orf222P0C671 652 aaPredicted RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 GJA9P57773 515 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 MDM2Q00987 491 aaPredicted RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 KCNA10Q16322 511 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 USH1GQ495M9 461 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 RNF207Q6ZRF8 634 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 STOX1Q6ZVD7 989 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 SKAP1Q86WV1 359 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 FBXO16Q8IX29 292 aaPredicted RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 ADGRF4Q8IZF3 695 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 UBE2OQ9C0C9 1292 aaKnown RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 SPC25Q9HBM1 224 aa22.11■■□□□ 1.13
COL5A1-203ENST00000460264 ADD3Q9UEY8 706 aaKnown RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 RBM8AQ9Y5S9 174 aaKnown RBP22.11■■□□□ 1.13
COL5A1-203ENST00000460264 MOXD2PA6NHM9 499 aa22.1■■□□□ 1.13
COL5A1-203ENST00000460264 ALDH5A1P51649 535 aaPredicted RBP22.1■■□□□ 1.13
COL5A1-203ENST00000460264 TNFAIP2Q03169 654 aa22.1■■□□□ 1.13
COL5A1-203ENST00000460264 RALYLQ86SE5 291 aaKnown RBP22.1■■□□□ 1.13
COL5A1-203ENST00000460264 VTA1Q9NP79 307 aa22.1■■□□□ 1.13
COL5A1-203ENST00000460264 PRKAG2Q9UGJ0 569 aa22.1■■□□□ 1.13
COL5A1-203ENST00000460264 LAMA3Q16787 3333 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 LOC102724159A0A0B4J2E5 919 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 CTAGE5O15320 804 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 CALML3P27482 149 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 RPS6P62753 249 aaKnown RBP22.09■■□□□ 1.13
COL5A1-203ENST00000460264 NKX3-2P78367 333 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 TLE2Q04725 743 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 PWP2Q15269 919 aaKnown RBP22.09■■□□□ 1.13
COL5A1-203ENST00000460264 TAPT1Q6NXT6 567 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 EEPD1Q7L9B9 569 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 STAG2Q8N3U4 1231 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 NCOA7Q8NI08 942 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 NUP133Q8WUM0 1156 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 LBHD1Q9BQE6 289 aaPredicted RBP22.09■■□□□ 1.13
COL5A1-203ENST00000460264 PDLIM7Q9NR12 457 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 PDGFCQ9NRA1 345 aa22.09■■□□□ 1.13
COL5A1-203ENST00000460264 GNEQ9Y223 722 aaKnown RBP22.09■■□□□ 1.13
COL5A1-203ENST00000460264 SZT2Q5T011 3432 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 IFIT3O14879 490 aaKnown RBP22.08■■□□□ 1.13
COL5A1-203ENST00000460264 QRICH1Q2TAL8 776 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 BMP2KLQ5H9B9 411 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 NOL8Q76FK4 1167 aaKnown RBP22.08■■□□□ 1.13
COL5A1-203ENST00000460264 TDHQ8IZJ6 230 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 PCSK9Q8NBP7 692 aaKnown RBP22.08■■□□□ 1.13
COL5A1-203ENST00000460264 ESYT1Q9BSJ8 1104 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 LSG1Q9H089 658 aaKnown RBP22.08■■□□□ 1.13
COL5A1-203ENST00000460264 JMJD4Q9H9V9 463 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 PRDM5Q9NQX1 630 aaPredicted RBP22.08■■□□□ 1.13
COL5A1-203ENST00000460264 STARD7Q9NQZ5 370 aa22.08■■□□□ 1.13
COL5A1-203ENST00000460264 ABCB11O95342 1321 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 SOX1O00570 391 aaPredicted RBP22.07■■□□□ 1.12
COL5A1-203ENST00000460264 DHX16O60231 1041 aaKnown RBP22.07■■□□□ 1.12
COL5A1-203ENST00000460264 SMPD1P17405 629 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 GNASQ5JWF2 1037 aa22.07■■□□□ 1.12
COL5A1-203ENST00000460264 KIAA1211Q6ZU35 1233 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms