RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
SRRT-206ENST00000460194 TSPY3P0CV98 308 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 TSPY8P0CW00 308 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 MCCP23508 829 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 TNFAIP2Q03169 654 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 TKFCQ3LXA3 575 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 MUM1L1Q5H9M0 696 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 CXCL17Q6UXB2 119 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 RASGRP2Q7LDG7 609 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 FAM160B2Q86V87 743 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
SRRT-206ENST00000460194 SYMPKQ92797 1274 aaKnown RBP15.71■□□□□ 0.11
SRRT-206ENST00000460194 SPC25Q9HBM1 224 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 INCENPQ9NQS7 918 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 CYP39A1Q9NYL5 469 aa15.71■□□□□ 0.11
SRRT-206ENST00000460194 SCN10AQ9Y5Y9 1956 aa15.71■□□□□ 0.1
SRRT-206ENST00000460194 TTC41PQ6P2S7 1318 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 ASB14A6NK59 587 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 NMT2O60551 498 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 APPP05067 770 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 FGRP09769 529 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 SLC1A4P43007 532 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 PDE4BQ07343 736 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 ITGA7Q13683 1181 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 TJAP1Q5JTD0 557 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 AKNAD1Q5T1N1 836 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 RCSD1Q6JBY9 416 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 PSRC1Q6PGN9 363 aaPredicted RBP15.7■□□□□ 0.1
SRRT-206ENST00000460194 CHURC1Q8WUH1 139 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 PURBQ96QR8 312 aaKnown RBP15.7■□□□□ 0.1
SRRT-206ENST00000460194 WNT8AQ9H1J5 351 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 PRR12Q9ULL5 1215 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 Q9Y3F1 56 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 BDP1A6H8Y1 2624 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 XIRP2A4UGR9 3374 aa15.7■□□□□ 0.1
SRRT-206ENST00000460194 TLR3O15455 904 aaKnown RBP15.69■□□□□ 0.1
SRRT-206ENST00000460194 B4GALT4O60513 344 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 CABYRO75952 493 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 SNAP25P60880 206 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 FSCN1Q16658 493 aaKnown RBP15.69■□□□□ 0.1
SRRT-206ENST00000460194 IQSEC1Q6DN90 963 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 KCTD1Q719H9 257 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 TLK2Q86UE8 772 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 VTI1AQ96AJ9 217 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 GPATCH3Q96I76 525 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 NOC4LQ9BVI4 516 aaKnown RBP15.69■□□□□ 0.1
SRRT-206ENST00000460194 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 YBX2Q9Y2T7 364 aaKnown RBP15.69■□□□□ 0.1
SRRT-206ENST00000460194 CTDP1Q9Y5B0 961 aaPredicted RBP15.69■□□□□ 0.1
SRRT-206ENST00000460194 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
SRRT-206ENST00000460194 CCDC174Q6PII3 467 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 CCDC129Q6ZRS4 1044 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 SEZ6LQ9BYH1 1024 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 NAPBQ9H115 298 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 TRPV6Q9H1D0 765 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 HIPK3Q9H422 1215 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
SRRT-206ENST00000460194 TET1Q8NFU7 2136 aa15.67■□□□□ 0.1
SRRT-206ENST00000460194 DYNC1LI2O43237 492 aaPredicted RBP15.67■□□□□ 0.1
SRRT-206ENST00000460194 FGBP02675 491 aa15.67■□□□□ 0.1
SRRT-206ENST00000460194 ALAS1P13196 640 aa15.67■□□□□ 0.1
SRRT-206ENST00000460194 CTDSPL2Q05D32 466 aa15.67■□□□□ 0.1
SRRT-206ENST00000460194 BTNL9Q6UXG8 535 aa15.67■□□□□ 0.1
SRRT-206ENST00000460194 FBXO16Q8IX29 292 aaPredicted RBP15.67■□□□□ 0.1
SRRT-206ENST00000460194 RANBP17Q9H2T7 1088 aaKnown RBP15.67■□□□□ 0.1
SRRT-206ENST00000460194 PTPRSQ13332 1948 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 RBM47A0AV96 593 aaKnown RBP15.66■□□□□ 0.1
SRRT-206ENST00000460194 ICAM1P05362 532 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 PSMC6P62333 389 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
SRRT-206ENST00000460194 CHMP4CQ96CF2 233 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 STX8Q9UNK0 236 aa15.66■□□□□ 0.1
SRRT-206ENST00000460194 TRIP12Q14669 1992 aaPredicted RBP15.66■□□□□ 0.1
SRRT-206ENST00000460194 TANC1Q9C0D5 1861 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 TNFRSF10AO00220 468 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 ORC4O43929 436 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 CCL23P55773 120 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 RAB30Q15771 203 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
SRRT-206ENST00000460194 DUSP28Q4G0W2 176 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 TTBK2Q6IQ55 1244 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 OTOP2Q7RTS6 562 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 ASB2Q96Q27 587 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 GAS2L1Q99501 681 aaPredicted RBP15.65■□□□□ 0.1
SRRT-206ENST00000460194 ALDH8A1Q9H2A2 487 aaPredicted RBP15.65■□□□□ 0.1
SRRT-206ENST00000460194 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
SRRT-206ENST00000460194 TCF20Q9UGU0 1960 aaKnown RBP15.65■□□□□ 0.1
SRRT-206ENST00000460194 PRRC2BQ5JSZ5 2229 aaKnown RBP15.64■□□□□ 0.09
SRRT-206ENST00000460194 TSPY2A6NKD2 308 aa15.64■□□□□ 0.09
SRRT-206ENST00000460194 ERC2O15083 957 aa15.64■□□□□ 0.09
SRRT-206ENST00000460194 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
SRRT-206ENST00000460194 BAATQ14032 418 aaPredicted RBP15.64■□□□□ 0.09
SRRT-206ENST00000460194 ALX1Q15699 326 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms