RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 CCL14Q16627 93 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 DHX32Q7L7V1 743 aaKnown RBP11.76□□□□□ -0.53
RFX3-210ENST00000457373 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 TRIB2Q92519 343 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 DDX11Q96FC9 970 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 ZNF333Q96JL9 665 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 JAKMIP1Q96N16 626 aaKnown RBP11.76□□□□□ -0.53
RFX3-210ENST00000457373 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 MYL10Q9BUA6 226 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 CCPG1Q9ULG6 757 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 PLXNA1Q9UIW2 1896 aa11.76□□□□□ -0.53
RFX3-210ENST00000457373 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
RFX3-210ENST00000457373 KLRF2D3W0D1 207 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
RFX3-210ENST00000457373 COBLO75128 1261 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 INHAP05111 366 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 PGK2P07205 417 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 XRCC5P13010 732 aaKnown RBP11.75□□□□□ -0.53
RFX3-210ENST00000457373 LIFRP42702 1097 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
RFX3-210ENST00000457373 PDE4DQ08499 809 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 GRM4Q14833 912 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 TKFCQ3LXA3 575 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 BLOC1S2Q6QNY1 142 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 ADGRF4Q8IZF3 695 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 ZNF654Q8IZM8 581 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 ANKRD35Q8N283 1001 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 APBA2Q99767 749 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 RNF146Q9NTX7 359 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
RFX3-210ENST00000457373 HMGCRP04035 888 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 ICAM1P05362 532 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
RFX3-210ENST00000457373 CCL5P13501 91 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 RXRAP19793 462 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 PSMA5P28066 241 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 FGD1P98174 961 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 TROAPQ12815 778 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
RFX3-210ENST00000457373 USH1GQ495M9 461 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
RFX3-210ENST00000457373 ABRAQ8N0Z2 381 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 CTCFLQ8NI51 663 aaPredicted RBP11.74□□□□□ -0.53
RFX3-210ENST00000457373 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 RNF208Q9H0X6 261 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 UNC93B1Q9H1C4 597 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 ACAD9Q9H845 621 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 JMJD4Q9H9V9 463 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 FLRT1Q9NZU1 646 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 FBXO40Q9UH90 709 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
RFX3-210ENST00000457373 GPR37O15354 613 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 DDAH1O94760 285 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 SEC24BO95487 1268 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 HOXC6P09630 235 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
RFX3-210ENST00000457373 QRICH1Q2TAL8 776 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 NSMFQ6X4W1 530 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 Q6ZUG5 572 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 WDR19Q8NEZ3 1342 aa11.73□□□□□ -0.53
RFX3-210ENST00000457373 NAP1L2Q9ULW6 460 aaPredicted RBP11.73□□□□□ -0.53
RFX3-210ENST00000457373 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
RFX3-210ENST00000457373 CALM1P0DP23 149 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 CALM2P0DP24 149 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 CALM3P0DP25 149 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 CYP2C19P33261 490 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 CACNB2Q08289 660 aaPredicted RBP11.72□□□□□ -0.53
RFX3-210ENST00000457373 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 SGMS1Q86VZ5 419 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 HOMER1Q86YM7 354 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 PIGSQ96S52 555 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
RFX3-210ENST00000457373 BRPF3Q9ULD4 1205 aa11.72□□□□□ -0.53
RFX3-210ENST00000457373 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
RFX3-210ENST00000457373 RPTORQ8N122 1335 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 KLF18A0A0U1RQI7 1052 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 POTEB2H3BUK9 544 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 NFIBO00712 420 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.53
RFX3-210ENST00000457373 CNGA1P29973 690 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 KIF5BP33176 963 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 APOBRQ0VD83 1088 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms