RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 KIAA0355O15063 1070 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 SHHQ15465 462 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 C9orf50Q5SZB4 431 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 SYDE2Q5VT97 1194 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 CWC27Q6UX04 472 aaKnown RBP21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 MFSD6Q6ZSS7 791 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 TTC14Q96N46 770 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 PURBQ96QR8 312 aaKnown RBP21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 MTMR10Q9NXD2 777 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 CCPG1Q9ULG6 757 aa21.82■■□□□ 1.08
UBE2D4-208ENST00000454350 FRMPD2Q68DX3 1309 aaPredicted RBP21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 CLTBP09497 229 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 CDK7P50613 346 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 ZNF543Q08ER8 600 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 FAAP100Q0VG06 881 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 MORC4Q8TE76 937 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 TOX2Q96NM4 488 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 IL25Q9H293 177 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 STARD7Q9NQZ5 370 aa21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 GNEQ9Y223 722 aaKnown RBP21.81■■□□□ 1.08
UBE2D4-208ENST00000454350 PQBP1O60828 265 aaKnown RBP21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 ASGR1P07306 291 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 C6orf222P0C671 652 aaPredicted RBP21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 PTGS1P23219 599 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 PDE4AP27815 886 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 MFAP1P55081 439 aaKnown RBP21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 GPCPD1Q9NPB8 672 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 CDH23Q9H251 3354 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 ELP1O95163 1332 aa21.8■■□□□ 1.08
UBE2D4-208ENST00000454350 ASB14A6NK59 587 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 NFIBO00712 420 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 EPHB4P54760 987 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 TMEM63BQ5T3F8 832 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 TAPT1Q6NXT6 567 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 NUP133Q8WUM0 1156 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 CLEC4DQ8WXI8 215 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 RNF41Q9H4P4 317 aaPredicted RBP21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 PDGFCQ9NRA1 345 aa21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
UBE2D4-208ENST00000454350 TNFAIP2Q03169 654 aa21.78■■□□□ 1.08
UBE2D4-208ENST00000454350 FAM109BQ6ICB4 259 aaPredicted RBP21.78■■□□□ 1.08
UBE2D4-208ENST00000454350 PCSK9Q8NBP7 692 aaKnown RBP21.78■■□□□ 1.08
UBE2D4-208ENST00000454350 ZKSCAN3Q9BRR0 538 aa21.78■■□□□ 1.08
UBE2D4-208ENST00000454350 DSCC1Q9BVC3 393 aa21.78■■□□□ 1.08
UBE2D4-208ENST00000454350 ZNF213O14771 459 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 SMPD1P17405 629 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 BAATQ14032 418 aaPredicted RBP21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 GNASQ5JWF2 1037 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 NSMFQ6X4W1 530 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 ANKS1AQ92625 1134 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 ESR2Q92731 530 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 TBX21Q9UL17 535 aa21.77■■□□□ 1.08
UBE2D4-208ENST00000454350 GSPT1P15170 499 aaKnown RBP21.76■■□□□ 1.07
UBE2D4-208ENST00000454350 BEX3Q00994 111 aa21.76■■□□□ 1.07
UBE2D4-208ENST00000454350 DGKHQ86XP1 1220 aa21.76■■□□□ 1.07
UBE2D4-208ENST00000454350 GLT1D1Q96MS3 346 aa21.76■■□□□ 1.07
UBE2D4-208ENST00000454350 TMEM39AQ9NV64 488 aa21.76■■□□□ 1.07
UBE2D4-208ENST00000454350 B4E1Z4 1266 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 HIP1O00291 1037 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 KDM4AO75164 1064 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 EEPD1Q7L9B9 569 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 FBXO16Q8IX29 292 aaPredicted RBP21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 CPVLQ9H3G5 476 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 STXBP5LQ9Y2K9 1186 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 WDR19Q8NEZ3 1342 aa21.75■■□□□ 1.07
UBE2D4-208ENST00000454350 KIAA1217Q5T5P2 1943 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 DCDC2CA8MYV0 355 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 ARVCFO00192 962 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 GOLGA8HP0CJ92 632 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 RAG1P15918 1043 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 NT5C2P49902 561 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 ALDH5A1P51649 535 aaPredicted RBP21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 IQSEC1Q6DN90 963 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 SLC30A10Q6XR72 485 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 TLK2Q86UE8 772 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 FAM126BQ8IXS8 530 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 SLC43A3Q8NBI5 491 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 GUCD1Q96NT3 240 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 ZSWIM5Q9P217 1185 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 GRIN2DO15399 1336 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 A0A0C4DFX4 3053 aa21.74■■□□□ 1.07
UBE2D4-208ENST00000454350 ENAHQ8N8S7 591 aaPredicted RBP21.73■■□□□ 1.07
UBE2D4-208ENST00000454350 VTA1Q9NP79 307 aa21.73■■□□□ 1.07
UBE2D4-208ENST00000454350 Q9Y3F1 56 aa21.73■■□□□ 1.07
UBE2D4-208ENST00000454350 SCN10AQ9Y5Y9 1956 aa21.73■■□□□ 1.07
UBE2D4-208ENST00000454350 LOC102724159A0A0B4J2E5 919 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 A0A0U1RQG5 324 aaPredicted RBP21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 TIMP1P01033 207 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 CD4P01730 458 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 PWP2Q15269 919 aaKnown RBP21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 FSCN1Q16658 493 aaKnown RBP21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 TTC22Q5TAA0 569 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 CXCL17Q6UXB2 119 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 PNMA1Q8ND90 353 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 UBA5Q9GZZ9 404 aa21.72■■□□□ 1.07
UBE2D4-208ENST00000454350 BAZ2BQ9UIF8 2168 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms