RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PGK2P07205 417 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 ZNF792Q3KQV3 632 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 TMTC3Q6ZXV5 915 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 FBXO11Q86XK2 927 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 CLEC4DQ8WXI8 215 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 DDX11Q96FC9 970 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 PIGSQ96S52 555 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 ALDH8A1Q9H2A2 487 aaPredicted RBP32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 FLRT1Q9NZU1 646 aa32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 DIS3Q9Y2L1 958 aaKnown RBP32.49■■■□□ 2.79
SMARCC1-203ENST00000454240 IGHA2P01877 340 aa32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 HMGCRP04035 888 aa32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 RTN1Q16799 776 aa32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 USH1GQ495M9 461 aa32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 CMTR1Q8N1G2 835 aaKnown RBP32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 C22orf23Q9BZE7 217 aa32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 A1CFQ9NQ94 594 aaKnown RBP32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 FAM217BQ9NTX9 383 aaPredicted RBP32.48■■■□□ 2.79
SMARCC1-203ENST00000454240 NID2Q14112 1375 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 GOLGA8AA7E2F4 631 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 GOLGA8BA8MQT2 603 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 PPP1R11O60927 126 aaPredicted RBP32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 INHAP05111 366 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 PPP2R5BQ15173 497 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 HOMER1Q86YM7 354 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 AMNQ9BXJ7 453 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 BIN2Q9UBW5 565 aaPredicted RBP32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 NAP1L2Q9ULW6 460 aaPredicted RBP32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 ABCB11O95342 1321 aa32.47■■■□□ 2.79
SMARCC1-203ENST00000454240 PNMA6FA0A0J9YX94 578 aa32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 NFIBO00712 420 aa32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 RBM25P49756 843 aaKnown RBP32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 OLFML2BQ68BL8 750 aa32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 MAML3Q96JK9 1138 aa32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 PFASO15067 1338 aa32.46■■■□□ 2.79
SMARCC1-203ENST00000454240 LCTP09848 1927 aa32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 PDIA3P30101 505 aaKnown RBP32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 CDC27P30260 824 aa32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 METAP2P50579 478 aaKnown RBP eCLIP32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 UBXN2AP68543 259 aa32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 CYP39A1Q9NYL5 469 aa32.45■■■□□ 2.79
SMARCC1-203ENST00000454240 TRIM32Q13049 653 aa32.44■■■□□ 2.78
SMARCC1-203ENST00000454240 RRP36Q96EU6 259 aaKnown RBP32.44■■■□□ 2.78
SMARCC1-203ENST00000454240 RBBP6Q7Z6E9 1792 aaKnown RBP32.44■■■□□ 2.78
SMARCC1-203ENST00000454240 FUT2Q10981 343 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 NSMFQ6X4W1 530 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 CCDC82Q8N4S0 544 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 FAM133AQ8N9E0 248 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 RGS22Q8NE09 1264 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 ZNF274Q96GC6 653 aaPredicted RBP32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 KIF2CQ99661 725 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 MAF1Q9H063 256 aa32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 MRPL11Q9Y3B7 192 aaKnown RBP32.43■■■□□ 2.78
SMARCC1-203ENST00000454240 CCDC196A0A1B0GTZ2 297 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 CCDC85CA6NKD9 419 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 ADD1P35611 737 aaKnown RBP32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 TRAF1Q13077 416 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 MTFR1Q15390 333 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 MAP3K21Q5TCX8 1036 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 PIBF1Q8WXW3 757 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 BACH2Q9BYV9 841 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 PCDHA1Q9Y5I3 950 aa32.42■■■□□ 2.78
SMARCC1-203ENST00000454240 POTEB2H3BUK9 544 aa32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 ZNF467Q7Z7K2 595 aaPredicted RBP32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 FGD4Q96M96 766 aa32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 LARP6Q9BRS8 491 aaKnown RBP32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 UPF2Q9HAU5 1272 aaKnown RBP32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 CNTNAP5Q8WYK1 1306 aa32.41■■■□□ 2.78
SMARCC1-203ENST00000454240 NEK4P51957 841 aa32.4■■■□□ 2.78
SMARCC1-203ENST00000454240 CNTN2Q02246 1040 aa32.4■■■□□ 2.78
SMARCC1-203ENST00000454240 CACNB2Q08289 660 aaPredicted RBP32.4■■■□□ 2.78
SMARCC1-203ENST00000454240 BAATQ14032 418 aaPredicted RBP32.4■■■□□ 2.78
SMARCC1-203ENST00000454240 MFSD14CQ5VZR4 134 aa32.4■■■□□ 2.78
SMARCC1-203ENST00000454240 CCL5P13501 91 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 CYP2C19P33261 490 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 AK2P54819 239 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 ANKRD1Q15327 319 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 RNF207Q6ZRF8 634 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 SEC63Q9UGP8 760 aaKnown RBP32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 BRCA2P51587 3418 aa32.39■■■□□ 2.78
SMARCC1-203ENST00000454240 MCM3APO60318 1980 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 OPLAHO14841 1288 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 MYCP01106 439 aaPredicted RBP32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 PRKAR2AP13861 404 aaKnown RBP32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 MAMDC4Q6UXC1 1216 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 MCF2L2Q86YR7 1114 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 MSL3Q8N5Y2 521 aaKnown RBP32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 TBC1D5Q92609 795 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 TINF2Q9BSI4 451 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 UNC93B1Q9H1C4 597 aa32.38■■■□□ 2.77
SMARCC1-203ENST00000454240 RPTORQ8N122 1335 aa32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 PTPDC1A2A3K4 754 aa32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 SOWAHBA6NEL2 793 aa32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 RPS6P62753 249 aaKnown RBP32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 CCT2P78371 535 aaKnown RBP32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 SLC30A10Q6XR72 485 aa32.37■■■□□ 2.77
SMARCC1-203ENST00000454240 hCG_1642624A0A1W2PR95 340 aa32.36■■■□□ 2.77
SMARCC1-203ENST00000454240 GHRHRQ02643 423 aa32.36■■■□□ 2.77
SMARCC1-203ENST00000454240 NTRK3Q16288 839 aa32.36■■■□□ 2.77
SMARCC1-203ENST00000454240 HMX1Q9NP08 348 aaPredicted RBP32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms