RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 NUTM2EB1AL46 878 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 F8W031 263 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 RTCAO00442 366 aaKnown RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NMT2O60551 498 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 KPNA6O60684 536 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CD9P21926 228 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 MCM2P49736 904 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SEC13P55735 322 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SCRN1Q12765 414 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 WDR44Q5JSH3 913 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NUTM2DQ5VT03 806 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CEP135Q66GS9 1140 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 DGLUCYQ7Z3D6 616 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 LURAP1LQ8IV03 231 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 NUTM2AQ8IVF1 878 aaPredicted RBP5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SYCP3Q8IZU3 236 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 SMARCC2Q8TAQ2 1214 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 KIAA1524Q8TCG1 905 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 MOGAT1Q96PD6 335 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 RTEL1Q9NZ71 1219 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 CEP131Q9UPN4 1083 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 ARHGEF12Q9NZN5 1544 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 KIF14Q15058 1648 aa5.54□□□□□ -1.52
EPHA3-202ENST00000452448 ZMYM4Q5VZL5 1548 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 PZPP20742 1482 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 ARPC4-TTLL3A0A0A6YYG9 625 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 PDLIM1O00151 329 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SPTLC1O15269 473 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CYP27B1O15528 508 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SKAP2O75563 359 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 ZSCAN22P10073 491 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 RASA1P20936 1047 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 GPTP24298 496 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 HNRNPH1P31943 449 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 NOS2P35228 1153 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 PSMD7P51665 324 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CHMP4BP1P59074 171 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 NFE2Q16621 373 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CWF19L1Q69YN2 538 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 KSR2Q6VAB6 950 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 DSTYKQ6XUX3 929 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TMC7Q7Z402 723 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TADA2BQ86TJ2 420 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 PPFIBP1Q86W92 1011 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 OR8H2Q8N162 312 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 MAML1Q92585 1016 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 RBM18Q96H35 190 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CTAGE1Q96RT6 745 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 THUMPD2Q9BTF0 503 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 GPR108Q9NPR9 543 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TAGLN3Q9UI15 199 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 KIAA0556O60303 1618 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CPS1P31327 1500 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 RALGAPBQ86X10 1494 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TROQ12816 1431 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 USP47Q96K76 1375 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 IBTKQ9P2D0 1353 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TRIM64A6NGJ6 449 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TRIM64BA6NI03 449 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TEX28O15482 410 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 AHCYL1O43865 530 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 MGEA5O60502 916 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SCGB1D2O95969 90 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 LDHBP07195 334 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CDC25CP30307 473 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CASP2P42575 452 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SCNN1DP51172 638 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 G3BP1Q13283 466 aaKnown RBP eCLIP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 LRRFIP1Q32MZ4 808 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 FAM173BQ6P4H8 233 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CFAP161Q6P656 301 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 GRAMD2AQ8IUY3 354 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SLC15A3Q8IY34 581 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 USP38Q8NB14 1042 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 CEP95Q96GE4 821 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 MAELQ96JY0 434 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 NSRP1Q9H0G5 558 aaKnown RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 NDFIP2Q9NV92 336 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 EGFL7Q9UHF1 273 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 FBXO2Q9UK22 296 aaPredicted RBP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 TMED5Q9Y3A6 229 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 PCDHGB3Q9Y5G1 929 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.53□□□□□ -1.52
EPHA3-202ENST00000452448 ITSN2Q9NZM3 1697 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 KIF15Q9NS87 1388 aa5.53□□□□□ -1.52
EPHA3-202ENST00000452448 FAM221BA6H8Z2 402 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 IQCA1LA6NCM1 817 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 XPOTO43592 962 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 LGR5O75473 907 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ALDH1L1O75891 902 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ATF3P18847 181 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ATP5DP30049 168 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 MAPK8P45983 427 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 MASP1P48740 699 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 TPM4P67936 248 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 EXOSC10Q01780 885 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 IKQ13123 557 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms