RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 WDR19Q8NEZ3 1342 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 SYNRGQ9UMZ2 1314 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
USP40-207ENST00000450940 ADCY6O43306 1168 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 MYCNP04198 464 aaPredicted RBP22.73■■□□□ 1.23
USP40-207ENST00000450940 CST5P28325 142 aaPredicted RBP22.73■■□□□ 1.23
USP40-207ENST00000450940 NKX3-2P78367 333 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 MORC4Q8TE76 937 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 CLEC4DQ8WXI8 215 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 FERMT2Q96AC1 680 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 UPF3AQ9H1J1 476 aaKnown RBP22.73■■□□□ 1.23
USP40-207ENST00000450940 TNKSO95271 1327 aa22.73■■□□□ 1.23
USP40-207ENST00000450940 LOC102724159A0A0B4J2E5 919 aa22.72■■□□□ 1.23
USP40-207ENST00000450940 CYP21A2P08686 494 aa22.72■■□□□ 1.23
USP40-207ENST00000450940 GOLGA8HP0CJ92 632 aa22.72■■□□□ 1.23
USP40-207ENST00000450940 PWP2Q15269 919 aaKnown RBP22.72■■□□□ 1.23
USP40-207ENST00000450940 SEC23AQ15436 765 aa22.72■■□□□ 1.23
USP40-207ENST00000450940 NSMFQ6X4W1 530 aa22.72■■□□□ 1.23
USP40-207ENST00000450940 U3KPZ7 1027 aaPredicted RBP22.72■■□□□ 1.23
USP40-207ENST00000450940 LTBP2Q14767 1821 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 A0A1W2PQ45 241 aaPredicted RBP22.71■■□□□ 1.23
USP40-207ENST00000450940 A0A1W2PQY0 241 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 NFIBO00712 420 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 GJA9P57773 515 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 MAP4K1Q92918 833 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 UBAC1Q9BSL1 405 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 ATP11BQ9Y2G3 1177 aa22.71■■□□□ 1.23
USP40-207ENST00000450940 MOXD2PA6NHM9 499 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 ACLYP53396 1101 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 BAATQ14032 418 aaPredicted RBP22.7■■□□□ 1.22
USP40-207ENST00000450940 TRIM60Q495X7 471 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 CYB5R4Q7L1T6 521 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 UBA5Q9GZZ9 404 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 MAF1Q9H063 256 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 MYH6P13533 1939 aa22.7■■□□□ 1.22
USP40-207ENST00000450940 RGS22Q8NE09 1264 aa22.69■■□□□ 1.22
USP40-207ENST00000450940 PURBQ96QR8 312 aaKnown RBP22.69■■□□□ 1.22
USP40-207ENST00000450940 CPVLQ9H3G5 476 aa22.69■■□□□ 1.22
USP40-207ENST00000450940 PCDH10Q9P2E7 1040 aa22.69■■□□□ 1.22
USP40-207ENST00000450940 ADD3Q9UEY8 706 aaKnown RBP22.69■■□□□ 1.22
USP40-207ENST00000450940 CTAGE5O15320 804 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 TNFAIP2Q03169 654 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 TRDNQ13061 729 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 KCNA10Q16322 511 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 IFIT1BQ5T764 474 aaKnown RBP22.68■■□□□ 1.22
USP40-207ENST00000450940 TAPT1Q6NXT6 567 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 ADGRF4Q8IZF3 695 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 UBE2OQ9C0C9 1292 aaKnown RBP22.68■■□□□ 1.22
USP40-207ENST00000450940 SPC25Q9HBM1 224 aa22.68■■□□□ 1.22
USP40-207ENST00000450940 GNEQ9Y223 722 aaKnown RBP22.68■■□□□ 1.22
USP40-207ENST00000450940 MYADML2A6NDP7 307 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 PARP1P09874 1014 aaKnown RBP22.67■■□□□ 1.22
USP40-207ENST00000450940 TLE2Q04725 743 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 IQSEC1Q6DN90 963 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 RNF207Q6ZRF8 634 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 CENPQQ7L2Z9 268 aaPredicted RBP22.67■■□□□ 1.22
USP40-207ENST00000450940 TDHQ8IZJ6 230 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 PCSK9Q8NBP7 692 aaKnown RBP22.67■■□□□ 1.22
USP40-207ENST00000450940 NUP133Q8WUM0 1156 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 VTA1Q9NP79 307 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 PDLIM7Q9NR12 457 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 PRKAG2Q9UGJ0 569 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 TAF6LQ9Y6J9 622 aa22.67■■□□□ 1.22
USP40-207ENST00000450940 DDX49Q9Y6V7 483 aaKnown RBP22.67■■□□□ 1.22
USP40-207ENST00000450940 ELP1O95163 1332 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 PTPDC1A2A3K4 754 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 E7EWF7 191 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 C6orf222P0C671 652 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 ALDH5A1P51649 535 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 IRX5P78411 483 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 MDM2Q00987 491 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 CDC37Q16543 378 aaPredicted RBP22.66■■□□□ 1.22
USP40-207ENST00000450940 LRIT3Q3SXY7 679 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 SLC30A10Q6XR72 485 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 Q9Y3F1 56 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 SZT2Q5T011 3432 aa22.66■■□□□ 1.22
USP40-207ENST00000450940 SOX1O00570 391 aaPredicted RBP22.65■■□□□ 1.22
USP40-207ENST00000450940 RPS6P62753 249 aaKnown RBP22.65■■□□□ 1.22
USP40-207ENST00000450940 GNASQ5JWF2 1037 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 ANKRD33Q7Z3H0 272 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 DNERQ8NFT8 737 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 NCOA7Q8NI08 942 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 TOX2Q96NM4 488 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 LBHD1Q9BQE6 289 aaPredicted RBP22.65■■□□□ 1.22
USP40-207ENST00000450940 JMJD4Q9H9V9 463 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 STARD7Q9NQZ5 370 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 PDGFCQ9NRA1 345 aa22.65■■□□□ 1.22
USP40-207ENST00000450940 ABCB11O95342 1321 aa22.64■■□□□ 1.22
USP40-207ENST00000450940 RBM47A0AV96 593 aaKnown RBP22.64■■□□□ 1.21
USP40-207ENST00000450940 ASGR1P07306 291 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 SMPD1P17405 629 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 EDNRBP24530 442 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 STOX1Q6ZVD7 989 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 SH3RF1Q7Z6J0 888 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 MTMR8Q96EF0 704 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 RBM8AQ9Y5S9 174 aaKnown RBP22.64■■□□□ 1.21
USP40-207ENST00000450940 LAMA3Q16787 3333 aa22.64■■□□□ 1.21
USP40-207ENST00000450940 TRIM43BA6NCK2 446 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms