RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 TRIB2Q92519 343 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 ZNF274Q96GC6 653 aaPredicted RBP10.67□□□□□ -0.7
RFX3-207ENST00000449190 APBA2Q99767 749 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 AGXT2Q9BYV1 514 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 HMX1Q9NP08 348 aaPredicted RBP10.67□□□□□ -0.7
RFX3-207ENST00000449190 RBM28Q9NW13 759 aaKnown RBP10.67□□□□□ -0.7
RFX3-207ENST00000449190 SLC5A4Q9NY91 659 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 ZSWIM8A7E2V4 1837 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 DOCK3Q8IZD9 2030 aa10.67□□□□□ -0.7
RFX3-207ENST00000449190 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 GOLGA8BA8MQT2 603 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 SNHG28P0DPA3 235 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MCM2P49736 904 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 METAP2P50579 478 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFX3-207ENST00000449190 RCAN1P53805 252 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 AK2P54819 239 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 TROAPQ12815 778 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 COL9A3Q14050 684 aaPredicted RBP10.66□□□□□ -0.7
RFX3-207ENST00000449190 RTN1Q16799 776 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MAP3K21Q5TCX8 1036 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MFSD14CQ5VZR4 134 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 CPLX2Q6PUV4 134 aaKnown RBP10.66□□□□□ -0.7
RFX3-207ENST00000449190 APOA5Q6Q788 366 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MICU3Q86XE3 530 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 U2AF1L4Q8WU68 220 aaKnown RBP10.66□□□□□ -0.7
RFX3-207ENST00000449190 MYL10Q9BUA6 226 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 PAK6Q9NQU5 681 aaPredicted RBP10.66□□□□□ -0.7
RFX3-207ENST00000449190 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
RFX3-207ENST00000449190 BRPF3Q9ULD4 1205 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 LIMCH1Q9UPQ0 1083 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MGAMO43451 1857 aa10.66□□□□□ -0.7
RFX3-207ENST00000449190 MYH8P13535 1937 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 TFRCP02786 760 aaKnown RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 FCER1AP12319 257 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 ADORA2AP29274 412 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 SLC16A2P36021 539 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 OAZ1P54368 228 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 TRIM32Q13049 653 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 TOB2Q14106 344 aaPredicted RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 CCL14Q16627 93 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 TTBK2Q6IQ55 1244 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 BTNL9Q6UXG8 535 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 NOL8Q76FK4 1167 aaKnown RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 RAB11FIP4Q86YS3 637 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 CCDC144CPQ8IYA2 1237 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 NPLOC4Q8TAT6 608 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 ZSCAN31Q96LW9 406 aaPredicted RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 KIF2CQ99661 725 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 UBA5Q9GZZ9 404 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFX3-207ENST00000449190 SLKQ9H2G2 1235 aaPredicted RBP10.65□□□□□ -0.7
RFX3-207ENST00000449190 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 PNMA2Q9UL42 364 aa10.65□□□□□ -0.7
RFX3-207ENST00000449190 KIAA0100Q14667 2235 aaKnown RBP10.65□□□□□ -0.71
RFX3-207ENST00000449190 GREB1LQ9C091 1923 aaPredicted RBP10.64□□□□□ -0.71
RFX3-207ENST00000449190 CPLX1O14810 134 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 SNPHO15079 494 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 COBLO75128 1261 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 IGHA2P01877 340 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 RXRAP19793 462 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 SMARCA1P28370 1054 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 EVCP57679 992 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 CCT2P78371 535 aaKnown RBP10.64□□□□□ -0.71
RFX3-207ENST00000449190 AKAP17AQ02040 695 aaKnown RBP10.64□□□□□ -0.71
RFX3-207ENST00000449190 TRAF1Q13077 416 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 STK3Q13188 491 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 KCTD2Q14681 263 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 OLFML2BQ68BL8 750 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 MARVELD3Q96A59 401 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 MMP19Q99542 508 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
RFX3-207ENST00000449190 PRR12Q9ULL5 1215 aa10.64□□□□□ -0.71
RFX3-207ENST00000449190 DIS3Q9Y2L1 958 aaKnown RBP10.64□□□□□ -0.71
RFX3-207ENST00000449190 CDKL5O76039 1030 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 SLC4A3P48751 1232 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 SNRNP48Q6IEG0 339 aaKnown RBP10.63□□□□□ -0.71
RFX3-207ENST00000449190 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.63□□□□□ -0.71
RFX3-207ENST00000449190 ADGRF4Q8IZF3 695 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 STAG2Q8N3U4 1231 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 CHST13Q8NET6 341 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
RFX3-207ENST00000449190 RRP36Q96EU6 259 aaKnown RBP10.63□□□□□ -0.71
RFX3-207ENST00000449190 RAVER2Q9HCJ3 691 aaKnown RBP10.63□□□□□ -0.71
RFX3-207ENST00000449190 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms