RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 GALNT11Q8NCW6 608 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 AGBL3Q8NEM8 1001 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 NYXQ9GZU5 481 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 USP16Q9Y5T5 823 aa6.81□□□□□ -1.32
SDCBP-205ENST00000447267 COL3A1P02461 1466 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-205ENST00000447267 WDHD1O75717 1129 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-205ENST00000447267 GHRHP01286 108 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 GTF2A2P52657 109 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 IGF2-ASQ6U949 168 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 BADQ92934 168 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 TIFAQ96CG3 184 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 TEX13AQ9BXU3 409 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-205ENST00000447267 DEFB129Q9H1M3 183 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 CNTN3Q9P232 1028 aa6.8□□□□□ -1.32
SDCBP-205ENST00000447267 KMT2BQ9UMN6 2715 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-205ENST00000447267 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 CARNS1A5YM72 827 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 F8W735 103 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-205ENST00000447267 WISP1O95388 367 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 ACPPP15309 386 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 GPSM2P81274 684 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 NBPF12Q5TAG4 269 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-205ENST00000447267 TXNDC11Q6PKC3 985 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 PIK3R5Q8WYR1 880 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 CCDC97Q96F63 343 aaPredicted RBP6.79□□□□□ -1.32
SDCBP-205ENST00000447267 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 RASSF4Q9H2L5 321 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 KCNK4Q9NYG8 393 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 HEG1Q9ULI3 1381 aa6.79□□□□□ -1.32
SDCBP-205ENST00000447267 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-205ENST00000447267 A6NHS1 94 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 ERC2O15083 957 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 KCNQ3O43525 872 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 KIF4AO95239 1232 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 COL6A1P12109 1028 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 ARID4AP29374 1257 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-205ENST00000447267 EPHB4P54760 987 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 FCGRTP55899 365 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 MTMR3Q13615 1198 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
SDCBP-205ENST00000447267 ANKRD13AQ8IZ07 590 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
SDCBP-205ENST00000447267 CCDC82Q8N4S0 544 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 NGEFQ8N5V2 710 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
SDCBP-205ENST00000447267 POLKQ9UBT6 870 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 OGDHLQ9ULD0 1010 aa6.78□□□□□ -1.32
SDCBP-205ENST00000447267 TAF1P21675 1872 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 USP34Q70CQ2 3546 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 GRXCR1A8MXD5 290 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 TCF15Q12870 199 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 ST3GAL2Q16842 350 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 Q6ZS46 218 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 CEP120Q8N960 986 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 SH2B1Q9NRF2 756 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-205ENST00000447267 KANSL3Q9P2N6 904 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 PRKAG2Q9UGJ0 569 aa6.77□□□□□ -1.33
SDCBP-205ENST00000447267 ZFHX2Q9C0A1 2572 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-205ENST00000447267 UBN2Q6ZU65 1347 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 NTSR2O95665 410 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 HYAL2Q12891 473 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 ARTNQ5T4W7 220 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 PHLDB3Q6NSJ2 640 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 ZNF790Q6PG37 636 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 ASCL5Q7RTU5 278 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 APOBEC3FQ8IUX4 373 aaKnown RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 EDEM1Q92611 657 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
SDCBP-205ENST00000447267 ZC3H12CQ9C0D7 883 aaKnown RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 SENP6Q9GZR1 1112 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 PRDM5Q9NQX1 630 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 ABI2Q9NYB9 513 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-205ENST00000447267 DUOX1Q9NRD9 1551 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 CYSRT1A8MQ03 144 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 CETPP11597 493 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-205ENST00000447267 EPHA1P21709 976 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 MPSTP25325 297 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 GRAPQ13588 217 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 CEP135Q66GS9 1140 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.75□□□□□ -1.33
SDCBP-205ENST00000447267 GJD3Q8N144 294 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 TMEM130Q8N3G9 435 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 C1orf127Q8N9H9 656 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 TBC1D16Q8TBP0 767 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 GRAPLQ8TC17 118 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-205ENST00000447267 POP1Q99575 1024 aaKnown RBP6.75□□□□□ -1.33
SDCBP-205ENST00000447267 CHRDQ9H2X0 955 aa6.75□□□□□ -1.33
SDCBP-205ENST00000447267 WDFY4Q6ZS81 3184 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms