RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 LILRA2Q8N149 483 aa6.77□□□□□ -1.33
LINC00440-201ENST00000446579 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
LINC00440-201ENST00000446579 PRDM14Q9GZV8 571 aa6.77□□□□□ -1.33
LINC00440-201ENST00000446579 EPN3Q9H201 632 aa6.77□□□□□ -1.33
LINC00440-201ENST00000446579 PCDHB12Q9Y5F1 795 aa6.77□□□□□ -1.33
LINC00440-201ENST00000446579 NCANO14594 1321 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 KDM2BQ8NHM5 1336 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 SSU72P8A0A1W2PR75 194 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 FITM1A5D6W6 292 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 PMS1P54277 932 aaKnown RBP6.76□□□□□ -1.33
LINC00440-201ENST00000446579 CTSWP56202 376 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 TEKQ02763 1124 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 DUSP4Q13115 394 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 AUHQ13825 339 aaKnown RBP6.76□□□□□ -1.33
LINC00440-201ENST00000446579 TIGD5Q53EQ6 642 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 SMARCC1Q92922 1105 aaPredicted RBP6.76□□□□□ -1.33
LINC00440-201ENST00000446579 TCTN2Q96GX1 697 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 PCDH12Q9NPG4 1184 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 PRR13Q9NZ81 148 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 GPR160Q9UJ42 338 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 FBXL21Q9UKT6 434 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 PTCH2Q9Y6C5 1203 aa6.76□□□□□ -1.33
LINC00440-201ENST00000446579 PPP1R12AO14974 1030 aaPredicted RBP6.75□□□□□ -1.33
LINC00440-201ENST00000446579 PRAMEF1O95521 474 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 GYS2P54840 703 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 PCBP3P57721 371 aaKnown RBP6.75□□□□□ -1.33
LINC00440-201ENST00000446579 SSRP1Q08945 709 aaKnown RBP6.75□□□□□ -1.33
LINC00440-201ENST00000446579 SNW1Q13573 536 aaKnown RBP6.75□□□□□ -1.33
LINC00440-201ENST00000446579 TAF7LQ5H9L4 462 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 SPPL2CQ8IUH8 684 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 CCDC144CPQ8IYA2 1237 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 USHBP1Q8N6Y0 703 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 LINC00116Q8NCU8 138 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 MCOLN1Q9GZU1 580 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 CHST7Q9NS84 486 aa6.75□□□□□ -1.33
LINC00440-201ENST00000446579 ZNF214Q9UL59 606 aaPredicted RBP6.75□□□□□ -1.33
LINC00440-201ENST00000446579 FAM86C2PA6NEL3 165 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 RAB11FIP3O75154 756 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 VIL1P09327 827 aaKnown RBP6.74□□□□□ -1.33
LINC00440-201ENST00000446579 DLG4P78352 724 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 CHRNEQ04844 493 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 TCEA2Q15560 299 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 SLC10A6Q3KNW5 377 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 TKFCQ3LXA3 575 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 BBS9Q3SYG4 887 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 ZC3H12BQ5HYM0 836 aaKnown RBP6.74□□□□□ -1.33
LINC00440-201ENST00000446579 C7orf61Q8IZ16 206 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 ZSWIM2Q8NEG5 633 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 INTS4Q96HW7 963 aaKnown RBP6.74□□□□□ -1.33
LINC00440-201ENST00000446579 SP110Q9HB58 689 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
LINC00440-201ENST00000446579 PFDN2Q9UHV9 154 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 TCFL5Q9UL49 500 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 ZNF281Q9Y2X9 895 aa6.74□□□□□ -1.33
LINC00440-201ENST00000446579 ADCY3O60266 1144 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 SUSD5O60279 629 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 BUD31P41223 144 aaPredicted RBP6.73□□□□□ -1.33
LINC00440-201ENST00000446579 GALK1P51570 392 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 ZNF143P52747 638 aaPredicted RBP6.73□□□□□ -1.33
LINC00440-201ENST00000446579 ANAPC15P60006 121 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 NR0B2Q15466 257 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 ANKRD39Q53RE8 183 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 ANKS4BQ8N8V4 417 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 SGSM3Q96HU1 749 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 SPATA9Q9BWV2 254 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 CNOT6Q9ULM6 557 aaKnown RBP6.73□□□□□ -1.33
LINC00440-201ENST00000446579 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
LINC00440-201ENST00000446579 YBX2Q9Y2T7 364 aaKnown RBP6.73□□□□□ -1.33
LINC00440-201ENST00000446579 MYOCOSA0A1B0GUC4 107 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 C9IYK1 514 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 SYPP08247 313 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 BMP7P18075 431 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
LINC00440-201ENST00000446579 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
LINC00440-201ENST00000446579 MASP1P48740 699 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 SLC7A5Q01650 507 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 SIRT2Q8IXJ6 389 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 LRRC47Q8N1G4 583 aaKnown RBP6.72□□□□□ -1.33
LINC00440-201ENST00000446579 ZBTB38Q8NAP3 1195 aaPredicted RBP6.72□□□□□ -1.33
LINC00440-201ENST00000446579 LINC01599Q8WXQ3 324 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 SGPP1Q9BX95 441 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 FOXP3Q9BZS1 431 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 GFOD1Q9NXC2 390 aa6.72□□□□□ -1.33
LINC00440-201ENST00000446579 CCDC163A0A0D9SF12 145 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 IQCA1LA6NCM1 817 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 SEMA7AO75326 666 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 FAM153BP0C7A2 387 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 HOXA5P20719 270 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 AMPD3Q01432 767 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 DALRD3Q5D0E6 543 aaKnown RBP6.71□□□□□ -1.34
LINC00440-201ENST00000446579 KIAA1211LQ6NV74 962 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 WAPLQ7Z5K2 1190 aa6.71□□□□□ -1.34
LINC00440-201ENST00000446579 RPUSD2Q8IZ73 545 aaKnown RBP6.71□□□□□ -1.34
LINC00440-201ENST00000446579 METTL14Q9HCE5 456 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms