RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 KRT9P35527 623 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CYP4A11Q02928 519 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 ANKRD35Q8N283 1001 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 AGXT2Q9BYV1 514 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CCPG1Q9ULG6 757 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 ATP6V0A2Q9Y487 856 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 ARHGAP6O43182 974 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 AKR1B10O60218 316 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CCDC172P0C7W6 258 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 TMTC3Q6ZXV5 915 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 SPAG5Q96R06 1193 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 LRRC27Q9C0I9 530 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 LUC7L2Q9Y383 392 aaKnown RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 NOP56O00567 594 aaKnown RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CTIFO43310 598 aaKnown RBP11.79□□□□□ -0.52
TOP3B-210ENST00000444502 TBC1D8BQ0IIM8 1120 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 SEPT2Q15019 361 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 CABP7Q86V35 215 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 NCAPG2Q86XI2 1143 aa11.79□□□□□ -0.52
TOP3B-210ENST00000444502 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 BCL9O00512 1426 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 FAM170AA1A519 330 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 B4DLN1 442 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 IKBKBO14920 756 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 PLCD1P51178 756 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 ADGRA1Q86SQ6 560 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 CSGALNACT2Q8N6G5 542 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 CDC25BP30305 580 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 CETN1Q12798 172 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 RABEP2Q9H5N1 569 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 MROH7-TTC4A0A0A0MT08 1334 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 HERC4Q5GLZ8 1057 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-210ENST00000444502 SARM1Q6SZW1 724 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 ILDR1Q86SU0 546 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-210ENST00000444502 ZNF341Q9BYN7 854 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
TOP3B-210ENST00000444502 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
TOP3B-210ENST00000444502 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 ERLIN1O75477 346 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 EEPD1Q7L9B9 569 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 HS2ST1Q7LGA3 356 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 RPAINQ86UA6 219 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.52
TOP3B-210ENST00000444502 DPF2Q92785 391 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 AS3MTQ9HBK9 375 aa11.77□□□□□ -0.52
TOP3B-210ENST00000444502 SLIT3O75094 1523 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 TRAF5O00463 557 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 CLCN6P51797 869 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 EVCP57679 992 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 SLF1Q9BQI6 1058 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 JADE2Q9NQC1 790 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-210ENST00000444502 PCP11498 1178 aaKnown RBP11.77□□□□□ -0.53
TOP3B-210ENST00000444502 BMP3P12645 472 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 SMC1AQ14683 1233 aaKnown RBP11.77□□□□□ -0.53
TOP3B-210ENST00000444502 FAM114A1Q8IWE2 563 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 NELFCDQ8IXH7 590 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 SRBD1Q8N5C6 995 aaKnown RBP11.77□□□□□ -0.53
TOP3B-210ENST00000444502 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
TOP3B-210ENST00000444502 PNMA6AP0CW24 399 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 SUPT20HL1Q3ZLR7 823 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 DCAF17Q5H9S7 520 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 SPATA1Q5VX52 437 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 ARFGAP3Q9NP61 516 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 LRRC4BQ9NT99 713 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 TCHHQ07283 1943 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 GAS7O60861 476 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 IVLP07476 585 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 ETF1P62495 437 aaKnown RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 CCDC84Q86UT8 332 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 PAGE5Q96GU1 130 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 PPP1R13BQ96KQ4 1090 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 CAPZA3Q96KX2 299 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 SWAP70Q9UH65 585 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 PCDHA12Q9UN75 941 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 RHOXF2BP0C7M4 288 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 HOXA13P31271 388 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 UBE2SQ16763 222 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 TMEM47Q9BQJ4 181 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 RHOXF2Q9BQY4 288 aa11.76□□□□□ -0.53
TOP3B-210ENST00000444502 NOC4LQ9BVI4 516 aaKnown RBP11.76□□□□□ -0.53
TOP3B-210ENST00000444502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.538e-7■■■■■ 107.1
TOP3B-210ENST00000444502 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms