RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PCDHB15Q9Y5E8 787 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 ZNF536O15090 1300 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 SALL3Q9BXA9 1300 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 ICAM1P05362 532 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 FOSL2P15408 326 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 MFAP1P55081 439 aaKnown RBP16.3■□□□□ 0.2
PTPRE-203ENST00000442830 TLK2Q86UE8 772 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 CCPG1Q9ULG6 757 aa16.3■□□□□ 0.2
PTPRE-203ENST00000442830 MYADML2A6NDP7 307 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 FGRP09769 529 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 DNAJB2P25686 324 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 CCDC96Q2M329 555 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 KCTD1Q719H9 257 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
PTPRE-203ENST00000442830 CDH23Q9H251 3354 aa16.29■□□□□ 0.2
PTPRE-203ENST00000442830 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
PTPRE-203ENST00000442830 CTDSPL2Q05D32 466 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-203ENST00000442830 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
PTPRE-203ENST00000442830 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 BTNL9Q6UXG8 535 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 MORC4Q8TE76 937 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 MAF1Q9H063 256 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
PTPRE-203ENST00000442830 TTYH1Q9H313 450 aaPredicted RBP16.28■□□□□ 0.2
PTPRE-203ENST00000442830 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 MYO9BQ13459 2157 aa16.28■□□□□ 0.2
PTPRE-203ENST00000442830 LCTP09848 1927 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 SOWAHBA6NEL2 793 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 B4DLN1 442 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 ADCY6O43306 1168 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 CD4P01730 458 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 MRPL12P52815 198 aaKnown RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 PDE1AP54750 535 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 EPHB4P54760 987 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 RRP1P56182 461 aaKnown RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 SLC43A3Q8NBI5 491 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 OTUD7AQ8TE49 926 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 MYLIPQ8WY64 445 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 SYMPKQ92797 1274 aaKnown RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 TIFAQ96CG3 184 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 TTC14Q96N46 770 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 RNF41Q9H4P4 317 aaPredicted RBP16.27■□□□□ 0.2
PTPRE-203ENST00000442830 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
PTPRE-203ENST00000442830 RAD50Q92878 1312 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 CTAGE5O15320 804 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 RAB30Q15771 203 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 CCDC178Q5BJE1 867 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 SYDE2Q5VT97 1194 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 NSMFQ6X4W1 530 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
PTPRE-203ENST00000442830 COL25A1Q9BXS0 654 aaPredicted RBP16.26■□□□□ 0.19
PTPRE-203ENST00000442830 IL23AQ9NPF7 189 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 POLR3EQ9NVU0 708 aa16.26■□□□□ 0.19
PTPRE-203ENST00000442830 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPRE-203ENST00000442830 FOXP2O15409 715 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 SUPT20HL2P0C7V6 817 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 CPT1AP50416 773 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 RPUSD2Q8IZ73 545 aaKnown RBP16.25■□□□□ 0.19
PTPRE-203ENST00000442830 GAS2L1Q99501 681 aaPredicted RBP16.25■□□□□ 0.19
PTPRE-203ENST00000442830 HIPK3Q9H422 1215 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
PTPRE-203ENST00000442830 EYSQ5T1H1 3165 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 WDR19Q8NEZ3 1342 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-203ENST00000442830 DYNC1LI2O43237 492 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-203ENST00000442830 NMT2O60551 498 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 FGAP02671 866 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 PFKMP08237 780 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 CSF2RAP15509 400 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 SMPD1P17405 629 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 BEX3Q00994 111 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 DUSP28Q4G0W2 176 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 GPATCH4Q5T3I0 446 aaKnown RBP16.24■□□□□ 0.19
PTPRE-203ENST00000442830 TAPT1Q6NXT6 567 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 CXCL17Q6UXB2 119 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 HERVK_113Q902F9 699 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 MSRAQ9UJ68 235 aa16.24■□□□□ 0.19
PTPRE-203ENST00000442830 ASTN1O14525 1302 aa16.23■□□□□ 0.19
PTPRE-203ENST00000442830 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
PTPRE-203ENST00000442830 KPNA6O60684 536 aa16.23■□□□□ 0.19
PTPRE-203ENST00000442830 HSPD1P10809 573 aaKnown RBP16.23■□□□□ 0.19
PTPRE-203ENST00000442830 ALDH5A1P51649 535 aaPredicted RBP16.23■□□□□ 0.19
PTPRE-203ENST00000442830 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
PTPRE-203ENST00000442830 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms