RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 KRT77Q7Z794 578 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 NT5DC4Q86YG4 428 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCDC47Q96A33 483 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 ZNF512BQ96KM6 892 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 NAP1L4Q99733 375 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 DUSP15Q9H1R2 295 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 SPC25Q9HBM1 224 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 CHCHD3Q9NX63 227 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 BIN2Q9UBW5 565 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 NOL7Q9UMY1 257 aaKnown RBP5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 IL16Q14005 1332 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 CLASP1Q7Z460 1538 aa5.64□□□□□ -1.51
HMGB3P9-201ENST00000441799 EIF4G3O43432 1585 aaKnown RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 ERCC6L2Q5T890 1561 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 TCAF2A6NFQ2 919 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 KIF5CO60282 957 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 HSP90AB1P08238 724 aaKnown RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 SKILP12757 684 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 HOXA5P20719 270 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 MAGEA8P43361 318 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 KIR3DL1P43629 444 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 LINC00310P59036 64 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 POU5F1BQ06416 359 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 MAPRE1Q15691 268 aaKnown RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 TSNAXIP1Q2TAA8 658 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 GAB4Q2WGN9 574 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 AMOTQ4VCS5 1084 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCDC92Q53HC0 331 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 WIPI1Q5MNZ9 446 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 CIAPIN1Q6FI81 312 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 ZNF746Q6NUN9 644 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 TMPRSS7Q7RTY8 843 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 IQCF2Q8IXL9 164 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 LMNTD2Q8IXW0 634 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 MIGA1Q8NAN2 632 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 IL17RAQ96F46 866 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 Q96M66 194 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 NEUROD6Q96NK8 337 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 TEX13AQ9BXU3 409 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 LNPKQ9C0E8 428 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 TMEM59LQ9UK28 342 aa5.63□□□□□ -1.51
HMGB3P9-201ENST00000441799 CHD1O14646 1710 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 GIPC1O14908 333 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 MTA2O94776 668 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 NBPF7P0C2Y1 421 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 SETSIPP0DME0 302 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 SRFP11831 508 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 VAMP1P23763 118 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 MAPK1P28482 360 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 FMR1Q06787 632 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 KCTD2Q14681 263 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 PLEKHG6Q3KR16 790 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 IQCEQ6IPM2 695 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCDC70Q6NSX1 233 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 HSCBQ8IWL3 235 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 PIWIL2Q8TC59 973 aaKnown RBP5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 CHMP4CQ96CF2 233 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 SLC26A8Q96RN1 970 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 LZTS2Q9BRK4 669 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 LRRC27Q9C0I9 530 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 RNF32Q9H0A6 362 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 CASS4Q9NQ75 786 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 RRAGDQ9NQL2 400 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 TJP2Q9UDY2 1190 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 SFMBT1Q9UHJ3 866 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 ACAD8Q9UKU7 415 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 ISY1Q9ULR0 285 aaKnown RBP5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 RAD50Q92878 1312 aa5.62□□□□□ -1.51
HMGB3P9-201ENST00000441799 ANKRD18BA2A2Z9 1011 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 TULP2O00295 520 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 HIP1RO75146 1068 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 TPPPO94811 219 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 FGAP02671 866 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 CYP7A1P22680 504 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 MAPK8P45983 427 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 CLK1P49759 484 aaKnown RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 ZNF132P52740 706 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 CTSWP56202 376 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 DHX8Q14562 1220 aaKnown RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 RASA3Q14644 834 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 C16orf87Q6PH81 154 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 SV2BQ7L1I2 683 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 UBE2Q1Q7Z7E8 422 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 CREG2Q8IUH2 290 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 FRS2Q8WU20 508 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 GOLGA1Q92805 767 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 RUNDC1Q96C34 613 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 COX4I2Q96KJ9 171 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 ZNF396Q96N95 335 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 SLX1AQ9BQ83 275 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 C19orf44Q9H6X5 657 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 CGNQ9P2M7 1197 aaKnown RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 GNEQ9Y223 722 aaKnown RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 THRAP3Q9Y2W1 955 aaKnown RBP5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 PCDHB5Q9Y5E4 795 aa5.61□□□□□ -1.51
HMGB3P9-201ENST00000441799 HECW2Q9P2P5 1572 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms