RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 GPKOWQ92917 476 aaPredicted RBP eCLIP14.59□□□□□ -0.07
SCLT1-202ENST00000439369 AIFM3Q96NN9 605 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 SPATC1LQ9H0A9 340 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 RAVER2Q9HCJ3 691 aaKnown RBP14.59□□□□□ -0.07
SCLT1-202ENST00000439369 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 MAP3K20Q9NYL2 800 aaKnown RBP14.59□□□□□ -0.07
SCLT1-202ENST00000439369 VPS54Q9P1Q0 977 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 RBPJLQ9UBG7 517 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 FBXO40Q9UH90 709 aa14.59□□□□□ -0.07
SCLT1-202ENST00000439369 CA12O43570 354 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 AOC2O75106 756 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 CNMDO75829 334 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 CYP2C8P10632 490 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 MRPL12P52815 198 aaKnown RBP14.58□□□□□ -0.08
SCLT1-202ENST00000439369 NLRP5P59047 1200 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 SNAP25P60880 206 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 GRM1Q13255 1194 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 FAM110CQ1W6H9 321 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 SNRNP48Q6IEG0 339 aaKnown RBP14.58□□□□□ -0.08
SCLT1-202ENST00000439369 POTEEQ6S8J3 1075 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 MCF2L2Q86YR7 1114 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 CPXCR1Q8N123 301 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 GPRC5AQ8NFJ5 357 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 CUL5Q93034 780 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 COA7Q96BR5 231 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 AGBL1Q96MI9 1066 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 MROH8Q9H579 483 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 RIC8AQ9NPQ8 531 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 BTBD7Q9P203 1132 aa14.58□□□□□ -0.08
SCLT1-202ENST00000439369 SMCO2A6NFE2 343 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 PIK3CDO00329 1044 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 TLR2O60603 784 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 ADCY7P51828 1080 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 ERVK-24P63145 666 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 USH1GQ495M9 461 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 TYW1BQ6NUM6 668 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 ZIC5Q96T25 663 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 PAGR1Q9BTK6 254 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 FOXP1Q9H334 677 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-202ENST00000439369 PSTPIP2Q9H939 334 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 CHMP5Q9NZZ3 219 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 PCDHA4Q9UN74 947 aa14.57□□□□□ -0.08
SCLT1-202ENST00000439369 BAZ2BQ9UIF8 2168 aaKnown RBP14.56□□□□□ -0.08
SCLT1-202ENST00000439369 DTNBO60941 627 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 BCRP11274 1271 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 ALAS1P13196 640 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 KRT2P35908 639 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 BLIDQ8IZY5 108 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 CLEC4DQ8WXI8 215 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 SHISA4Q96DD7 197 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 MOV10L1Q9BXT6 1211 aaKnown RBP14.56□□□□□ -0.08
SCLT1-202ENST00000439369 ZSCAN16Q9H4T2 348 aaPredicted RBP14.56□□□□□ -0.08
SCLT1-202ENST00000439369 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 RNF146Q9NTX7 359 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 SAGE1Q9NXZ1 904 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 MTMR6Q9Y217 621 aa14.56□□□□□ -0.08
SCLT1-202ENST00000439369 COL11A1P12107 1806 aaPredicted RBP14.56□□□□□ -0.08
SCLT1-202ENST00000439369 VPS37CA5D8V6 355 aaPredicted RBP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 OPLAHO14841 1288 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 BRD1O95696 1058 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 HSD17B4P51659 736 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 PLS1Q14651 629 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 NPY5RQ15761 445 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 C17orf99Q6UX52 265 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 BRAPQ7Z569 592 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 DIS3L2Q8IYB7 885 aaKnown RBP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 REXO1Q8N1G1 1221 aaKnown RBP14.55□□□□□ -0.08
SCLT1-202ENST00000439369 KCNJ14Q9UNX9 436 aa14.55□□□□□ -0.08
SCLT1-202ENST00000439369 GCOM1H8Y6P7 765 aaPredicted RBP14.54□□□□□ -0.08
SCLT1-202ENST00000439369 M0R2N6 131 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 POLR2MP0CAP2 368 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 MAPK4P31152 587 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 CLK2P49760 499 aaKnown RBP14.54□□□□□ -0.08
SCLT1-202ENST00000439369 CRHR2Q13324 411 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 AP3B2Q13367 1082 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 NOM1Q5C9Z4 860 aaKnown RBP14.54□□□□□ -0.08
SCLT1-202ENST00000439369 KRT25Q7Z3Z0 450 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 ABRAQ8N0Z2 381 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 ANKRD13CQ8N6S4 541 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 GJB4Q9NTQ9 266 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 RIPK3Q9Y572 518 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 PFASO15067 1338 aa14.54□□□□□ -0.08
SCLT1-202ENST00000439369 RBBP6Q7Z6E9 1792 aaKnown RBP14.54□□□□□ -0.08
SCLT1-202ENST00000439369 MEIS2O14770 477 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 STRNO43815 780 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 HTRA3P83110 453 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 GUCY1B3Q02153 619 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 MAP2K1Q02750 393 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-202ENST00000439369 GNL2Q13823 731 aaKnown RBP14.53□□□□□ -0.08
SCLT1-202ENST00000439369 NOSTRINQ8IVI9 506 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 TNFRSF25Q93038 417 aa14.53□□□□□ -0.08
SCLT1-202ENST00000439369 ATP6V1DQ9Y5K8 247 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms