RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MRGPRX3Q96LB0 322 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 LNPKQ9C0E8 428 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 TNFRSF10DQ9UBN6 386 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 AKT3Q9Y243 479 aa5.6□□□□□ -1.51
TRAPPC13-204ENST00000438419 IQCA1LA6NCM1 817 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 CCDC85CA6NKD9 419 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 NOP56O00567 594 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 AURKAO14965 403 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 NRDCO43847 1150 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 GALK1P51570 392 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 RASA3Q14644 834 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 KIR3DS1Q14943 382 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 DPY19L1Q2PZI1 675 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 CEP128Q6ZU80 1094 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 NLRX1Q86UT6 975 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 LILRA2Q8N149 483 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 PPP1R14AQ96A00 147 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 SRPK1Q96SB4 655 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 PLCD4Q9BRC7 762 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 SNTG2Q9NY99 539 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 LRP2BPQ9P2M1 347 aa5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-204ENST00000438419 DBX1A6NMT0 343 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 STXBP3O00186 592 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 TBX1O43435 398 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 KCNH1O95259 989 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 CAPNS1P04632 268 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 ITGAVP06756 1048 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 RTP1P59025 263 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 CYP4F3Q08477 520 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 IFRD2Q12894 506 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 CCDC144BQ3MJ40 725 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 MTERF2Q49AM1 385 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 HSF5Q4G112 596 aaPredicted RBP5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 DPH6Q7L8W6 267 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 SLCO6A1Q86UG4 719 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 ZSWIM4Q9H7M6 989 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 GPR160Q9UJ42 338 aa5.58□□□□□ -1.52
TRAPPC13-204ENST00000438419 AMPD2Q01433 879 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 BMS1Q14692 1282 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 SNX17Q15036 470 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 SLC14A2Q15849 920 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 RCSD1Q6JBY9 416 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 ZNF227Q86WZ6 799 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 TRIM59Q8IWR1 403 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 LRRC47Q8N1G4 583 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 MRFAP1L1Q96HT8 127 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 PTCHD1Q96NR3 888 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 JMJD8Q96S16 334 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 CDK11AQ9UQ88 783 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 YBX2Q9Y2T7 364 aaKnown RBP5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 A0A1W2PQ45 241 aaPredicted RBP5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 A0A1W2PQY0 241 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 C2orf71A6NGG8 1288 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 GTF2IRD2BQ6EKJ0 949 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 PRR23BQ6ZRT6 265 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 GTF2IRD2Q86UP8 949 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 SIRT2Q8IXJ6 389 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 COPS5Q92905 334 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 BACE2Q9Y5Z0 518 aa5.57□□□□□ -1.52
TRAPPC13-204ENST00000438419 NCANO14594 1321 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 FAM221BA6H8Z2 402 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 PRRG2O14669 202 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 HLA-DQA1Q5Y7H0 255 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 EEF1DP3Q658K8 133 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 CYP2R1Q6VVX0 501 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 NAT16Q8N8M0 369 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 KCNK12Q9HB15 430 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 CWC22Q9HCG8 908 aaKnown RBP5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 ACSL6Q9UKU0 697 aa5.56□□□□□ -1.52
TRAPPC13-204ENST00000438419 LRRC10BA6NIK2 292 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 WTIPA6NIX2 430 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 ARNTLO00327 626 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 MSL3P1P0C860 447 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 MVKQ03426 396 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 SSRP1Q08945 709 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 MESP2Q0VG99 397 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 SCRN1Q12765 414 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 SF1Q15637 639 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 ZNF124Q15973 351 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 MLANAQ16655 118 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 GALNT18Q6P9A2 607 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 MPZL3Q6UWV2 235 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 INTS4Q96HW7 963 aaKnown RBP5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 SPATA9Q9BWV2 254 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 NKX2-4Q9H2Z4 354 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 CRTAC1Q9NQ79 661 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 GPRC5CQ9NQ84 441 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 CYP26B1Q9NR63 512 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 FAM53CQ9NYF3 392 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
TRAPPC13-204ENST00000438419 A0A1W2PQU0 124 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 PRKCAP17252 672 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 GRIA2P42262 883 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 SEPHS1P49903 392 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 PPP2R2AP63151 447 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms