RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 MCMDC2Q4G0Z9 681 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 PPP4R3BQ5MIZ7 849 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 TMEM63BQ5T3F8 832 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 C16orf59Q7L2K0 433 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 NUP133Q8WUM0 1156 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 DCAF4Q8WV16 495 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 TRERF1Q96PN7 1200 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 TMEM47Q9BQJ4 181 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 SEMA6BQ9H3T3 888 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
PNKDP1-201ENST00000435914 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 ASB14A6NK59 587 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 DCDC2CA8MYV0 355 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 ARVCFO00192 962 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 DLL1O00548 723 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 RANBP6O60518 1105 aaKnown RBP7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 PDHBP11177 359 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 TOP1P11387 765 aaKnown RBP7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 ALAS1P13196 640 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 RAG1P15918 1043 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 SMPD1P17405 629 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 BEX3Q00994 111 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 TNFAIP2Q03169 654 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 FPGSQ05932 587 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 AAMPQ13685 434 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 GNASQ5JWF2 1037 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 ZNF697Q5TEC3 545 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 MFSD5Q6N075 450 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 TBC1D10CQ8IV04 446 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 PLEKHM2Q8IWE5 1019 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 CLEC4DQ8WXI8 215 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 CHMP4CQ96CF2 233 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 VWCEQ96DN2 955 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 GLT1D1Q96MS3 346 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 FAM161BQ96MY7 647 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 CDX2Q99626 313 aaPredicted RBP7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 LNPKQ9C0E8 428 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 PDGFCQ9NRA1 345 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 TMEM39AQ9NV64 488 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 CTDP1Q9Y5B0 961 aaPredicted RBP7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 REV3LO60673 3130 aa7.3□□□□□ -1.24
PNKDP1-201ENST00000435914 SCN10AQ9Y5Y9 1956 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 MROH7Q68CQ1 1323 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 CCDC171Q6TFL3 1326 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 TMEM265A0A087WTH1 108 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 LOC102724159A0A0B4J2E5 919 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 A0A0U1RQG5 324 aaPredicted RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 NFIBO00712 420 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 IGHDP01880 384 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 PCP11498 1178 aaKnown RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 SDSP20132 328 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 EDNRBP24530 442 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 SLC16A2P36021 539 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 ZNF543Q08ER8 600 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 BAATQ14032 418 aaPredicted RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 PWP2Q15269 919 aaKnown RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 AKNAD1Q5T1N1 836 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 SYDE2Q5VT97 1194 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 CCDC174Q6PII3 467 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 CXCL17Q6UXB2 119 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 TLK2Q86UE8 772 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 FBXO16Q8IX29 292 aaPredicted RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 RNPC3Q96LT9 517 aaKnown RBP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 TTC14Q96N46 770 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 VTA1Q9NP79 307 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 CCPG1Q9ULG6 757 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 Q9Y3F1 56 aa7.29□□□□□ -1.24
PNKDP1-201ENST00000435914 NEDD4P46934 1319 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 WDR19Q8NEZ3 1342 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 CSF2RAP15509 400 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 ALDH5A1P51649 535 aaPredicted RBP7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 HAND2P61296 217 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 NUCB1Q02818 461 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 IKQ13123 557 aaPredicted RBP7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 FSCN1Q16658 493 aaKnown RBP7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 CCDC96Q2M329 555 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 DUSP28Q4G0W2 176 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 IQSEC1Q6DN90 963 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 NSMFQ6X4W1 530 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 CHD1LQ86WJ1 897 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 MYLIPQ8WY64 445 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 ANKS1AQ92625 1134 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 IL25Q9H293 177 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 SPC25Q9HBM1 224 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 TRANK1O15050 2925 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 GBF1Q92538 1859 aa7.28□□□□□ -1.24
PNKDP1-201ENST00000435914 UMODL1Q5DID0 1318 aa7.27□□□□□ -1.24
PNKDP1-201ENST00000435914 FRMPD2Q68DX3 1309 aaPredicted RBP7.27□□□□□ -1.24
PNKDP1-201ENST00000435914 TTC28Q96AY4 2481 aa7.27□□□□□ -1.24
PNKDP1-201ENST00000435914 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.27□□□□□ -1.25
PNKDP1-201ENST00000435914 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.27□□□□□ -1.25
PNKDP1-201ENST00000435914 DYNC1LI2O43237 492 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms