RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SOGA3Q5TF21 947 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 KLHL7Q8IXQ5 586 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 IFT20Q8IY31 132 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 MB21D2Q8IYB1 491 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ARFGAP2Q8N6H7 521 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ZNF473Q8WTR7 871 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 SDR42E1Q8WUS8 393 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 TACO1Q9BSH4 297 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 EPB41L5Q9HCM4 733 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 LRWD1Q9UFC0 647 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 XIRP1Q702N8 1843 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 LDHBP07195 334 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 CSF1RP07333 972 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 PDHBP11177 359 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 HMGB2P26583 209 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 KIF5BP33176 963 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 LSP1P33241 339 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 CASP7P55210 303 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ANTXR2P58335 489 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 HDLBPQ00341 1268 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 NAA35Q5VZE5 725 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 CACNA2D4Q7Z3S7 1137 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 ZSCAN29Q8IWY8 852 aaPredicted RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 MSL3Q8N5Y2 521 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 PAGE5Q96GU1 130 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 RNPC3Q96LT9 517 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 PLA2G12BQ9BX93 195 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 IFIH1Q9BYX4 1025 aaKnown RBP8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 CCDC113Q9H0I3 377 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 MMRN2Q9H8L6 949 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 SLC40A1Q9NP59 571 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 HAUS2Q9NVX0 235 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 EHD2Q9NZN4 543 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 DUSP10Q9Y6W6 482 aa8.22□□□□□ -1.09
SYNPO2-203ENST00000434046 TARSL2A2RTX5 802 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 BUB1O43683 1085 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 MOCS3O95396 460 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 GSTO1P78417 241 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 IKQ13123 557 aaPredicted RBP8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 ZNF804AQ7Z570 1209 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 NLRP14Q86W24 1093 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 SLF2Q8IX21 1173 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 CCDC13Q8IYE1 715 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 MARCH10Q8NA82 808 aaPredicted RBP8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 TCP11Q8WWU5 503 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 TAF4BQ92750 862 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 CCT8L2Q96SF2 557 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 AGXT2Q9BYV1 514 aa8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 AATFQ9NY61 560 aaKnown RBP eCLIP8.21□□□□□ -1.09
SYNPO2-203ENST00000434046 CACNA1FO60840 1977 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 B4DLN1 442 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 MCM7P33993 719 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 STAT6P42226 847 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PAK2Q13177 524 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 UBE4AQ14139 1066 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 HIBCHQ6NVY1 386 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 NFRKBQ6P4R8 1299 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 CYB5R4Q7L1T6 521 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 TEX11Q8IYF3 940 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 UBLCP1Q8WVY7 318 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 ZIM3Q96PE6 472 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 MAP3K14Q99558 947 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 ZNF219Q9P2Y4 722 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 SRP68Q9UHB9 627 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 FBXO2Q9UK22 296 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 CAMTA1Q9Y6Y1 1673 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 TRIM49BA6NDI0 452 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 SMIM23A6NLE4 172 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 EIF4E1BA6NMX2 242 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 RNF225M0QZC1 329 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PSMA7O14818 248 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 HGSO14964 777 aaPredicted RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PPP1R37O75864 691 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 HEXIM1O94992 359 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 KIF4AO95239 1232 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 GUCY1A2P33402 732 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 PTPROQ16827 1216 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 ALS2CLQ60I27 953 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 KRT26Q7Z3Y9 468 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 CCDC50Q8IVM0 306 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 CACNA2D3Q8IZS8 1091 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 OXER1Q8TDS5 423 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 MIEF2Q96C03 454 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 GSDMAQ96QA5 445 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 MLXIPQ9HAP2 919 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 STIM2Q9P246 746 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 GDAQ9Y2T3 454 aa8.21□□□□□ -1.1
SYNPO2-203ENST00000434046 AGPSO00116 658 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 NCK2O43639 380 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 GCFC2P16383 781 aaKnown RBP8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 ARID5AQ03989 594 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TCP11X2Q5H9J9 407 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 C2CD5Q86YS7 1000 aa8.2□□□□□ -1.1
SYNPO2-203ENST00000434046 TRIM58Q8NG06 486 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms