RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 PSEN2P49810 448 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 STAT2P52630 851 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 UBXN2AP68543 259 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 COL9A3Q14050 684 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 AMHR2Q16671 573 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 MORN1Q5T089 497 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 CREB3L3Q68CJ9 461 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 MB21D1Q8N884 522 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 ENAHQ8N8S7 591 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 PNMA1Q8ND90 353 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 REPS2Q8NFH8 660 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 NPLOC4Q8TAT6 608 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 DCAF4Q8WV16 495 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 TRIB2Q92519 343 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZNF333Q96JL9 665 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 AGBL1Q96MI9 1066 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 MMP19Q99542 508 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 SLC4A5Q9BY07 1137 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 UNC93B1Q9H1C4 597 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 MROH8Q9H579 483 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 SENP2Q9HC62 589 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 HOMER2Q9NSB8 354 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 ADGRG1Q9Y653 693 aa6.76□□□□□ -1.33
HMGB3P24-201ENST00000433260 PRC1O43663 620 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 STRNO43815 780 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 COBLO75128 1261 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SLC25A27O95847 323 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 TFRCP02786 760 aaKnown RBP6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 INHAP05111 366 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 PDHBP11177 359 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 FCER1AP12319 257 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ALAS1P13196 640 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ADORA2AP29274 412 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 CNGA1P29973 690 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ANTXR2P58335 489 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 IRF5Q13568 498 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 KCTD2Q14681 263 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 WTAPQ15007 396 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SEC23AQ15436 765 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ADCK5Q3MIX3 580 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 TMEM67Q5HYA8 995 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 PRAMEF19Q5SWL8 479 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 FAM160B2Q86V87 743 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 RIOX2Q8IUF8 465 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SHCBP1Q8NEM2 672 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 PXYLP1Q8TE99 480 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 NUP133Q8WUM0 1156 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ANKS1AQ92625 1134 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 USP6NLQ92738 828 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ARMC5Q96C12 935 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 TCEANC2Q96MN5 208 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 TRERF1Q96PN7 1200 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZBED2Q9BTP6 218 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 LRRC2Q9BYS8 371 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SLC38A10Q9HBR0 1119 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 FLRT1Q9NZU1 646 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZNF214Q9UL59 606 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SYNPO2Q9UMS6 1093 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 SMCHD1A6NHR9 2005 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 PLXNA1Q9UIW2 1896 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZNF536O15090 1300 aa6.75□□□□□ -1.33
HMGB3P24-201ENST00000433260 A0A0G2JMZ2 1700 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 PARP1P09874 1014 aaKnown RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CPA1P15085 419 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZKSCAN1P17029 563 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CCND3P30281 292 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CYP2C19P33261 490 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 MCM5P33992 734 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CACNB2Q08289 660 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 ZNF543Q08ER8 600 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 GRB14Q14449 540 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 SYDE2Q5VT97 1194 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 NUDT18Q6ZVK8 323 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 METTL3Q86U44 580 aaKnown RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 RAB11FIP4Q86YS3 637 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CCDC144CPQ8IYA2 1237 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 MB21D2Q8IYB1 491 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 ADGRF4Q8IZF3 695 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 ANKRD35Q8N283 1001 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 STAG2Q8N3U4 1231 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 IGDCC4Q8TDY8 1250 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 SOCS4Q8WXH5 440 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 TATDN2Q93075 761 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 DEFB118Q96PH6 123 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 NEK1Q96PY6 1258 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 TEX13BQ9BXU2 312 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 MYH6P13533 1939 aa6.74□□□□□ -1.33
HMGB3P24-201ENST00000433260 CCDC69A6NI79 296 aa6.73□□□□□ -1.33
HMGB3P24-201ENST00000433260 KLRF2D3W0D1 207 aa6.73□□□□□ -1.33
HMGB3P24-201ENST00000433260 SGPL1O95470 568 aa6.73□□□□□ -1.33
HMGB3P24-201ENST00000433260 HMGCRP04035 888 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms