RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TMEM232C9JQI7 657 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 GOLGA6DP0CG33 693 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 LMAN1P49257 510 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 TFCP2Q12800 502 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 WHAMMP3Q1A5X7 153 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 DALRD3Q5D0E6 543 aaKnown RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 FOXP4Q8IVH2 680 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 DCAF5Q96JK2 942 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 MPHOSPH6Q99547 160 aaKnown RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 DBNDD2Q9BQY9 259 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 IER2Q9BTL4 223 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 SIL1Q9H173 461 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 ZHX3Q9H4I2 956 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 GOLGA6AQ9NYA3 693 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 COL5A3P25940 1745 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-202ENST00000432306 ITIH6Q6UXX5 1313 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 NID2Q14112 1375 aa9.07□□□□□ -0.96
VTI1A-202ENST00000432306 BICDL2A1A5D9 508 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 BIN1O00499 593 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 BMP6P22004 513 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 ITPK1Q13572 414 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 MORC3Q14149 939 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 ZNF530Q6P9A1 599 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 TOGARAM2Q6ZUX3 1019 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 APTXQ7Z2E3 356 aaKnown RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 CTCFLQ8NI51 663 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 CEP89Q96ST8 783 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 FAM107BQ9H098 131 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 PAG1Q9NWQ8 432 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 HOOK1Q9UJC3 728 aaKnown RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 PCDHA5Q9Y5H7 936 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 MAST3O60307 1309 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 STK36Q9NRP7 1315 aa9.06□□□□□ -0.96
VTI1A-202ENST00000432306 MYH14Q7Z406 1995 aaKnown RBP9.06□□□□□ -0.96
VTI1A-202ENST00000432306 POTEB3A0JP26 581 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 FOXP2O15409 715 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 RNF113AO15541 343 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 ZFYP08048 801 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 RFC4P35249 363 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 POTEBQ6S5H4 581 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 EFCAB13Q8IY85 973 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 C10orf67Q8IYJ2 551 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC34Q96HJ3 373 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 EPC1Q9H2F5 836 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 MRPL44Q9H9J2 332 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 PDE11AQ9HCR9 933 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 RAI14Q9P0K7 980 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 EIF3CLB5ME19 914 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 AKR1B15C9JRZ8 316 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 SHOX2O60902 331 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 CAND2O75155 1236 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 CDKL5O76039 1030 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 ZMYM6O95789 1325 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 FOSP01100 380 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 GYS1P13807 737 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 KCNA3P22001 575 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 MCM3P25205 808 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 AMPD2Q01433 879 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 GUCY1B3Q02153 619 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 RC3H1Q5TC82 1133 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 C1orf216Q8TAB5 229 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 CCDC12Q8WUD4 166 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 PNKPQ96T60 521 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 CDC5LQ99459 802 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 EIF3CQ99613 913 aaKnown RBP9.05□□□□□ -0.96
VTI1A-202ENST00000432306 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
VTI1A-202ENST00000432306 ATXN2Q99700 1313 aaKnown RBP9.04□□□□□ -0.96
VTI1A-202ENST00000432306 H3BRB1 525 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 KIF5CO60282 957 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 CIAO1O76071 339 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 VEGFAP15692 232 aaPredicted RBP9.04□□□□□ -0.96
VTI1A-202ENST00000432306 ANTXR2P58335 489 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 PDE4BQ07343 736 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 PNOCQ13519 176 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 CASP8Q14790 479 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 LRRC31Q6UY01 552 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 DDX46Q7L014 1031 aaKnown RBP9.04□□□□□ -0.96
VTI1A-202ENST00000432306 ATG9AQ7Z3C6 839 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 VPS37DQ86XT2 251 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 RGL4Q8IZJ4 473 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 ZNF687Q8N1G0 1237 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 NCOA7Q8NI08 942 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 KLHDC4Q8TBB5 520 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms