RNA–Protein interactions for RNA: ENST00000430799.7

ARID1A-204, Transcript of AT-rich interaction domain 1A, human

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-204	ENST00000430799	IFT122	Q9HBG6	1241 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	PPAN	Q9NQ55	473 aa	Known RBP	12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	GOLGA8K	D6RF30	607 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	IFNB1	P01574	187 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	NSF	P46459	744 aa	Known RBP	12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	KANSL2	Q9H9L4	492 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	STK17A	Q9UEE5	414 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	PCDHA5	Q9Y5H7	936 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	ERVV-1	B6SEH8	477 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	RNF8	O76064	485 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	TBC1D8	O95759	1140 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	LMNB2	Q03252	620 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	DPY19L2	Q6NUT2	758 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	KIAA0825	Q8IV33	1275 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	ANKRD35	Q8N283	1001 aa		12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	SYMPK	Q92797	1274 aa	Known RBP	12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.01	□□□□□ -0.49
ARID1A-204	ENST00000430799	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	ABCB4	P21439	1286 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	TFDP1	Q14186	410 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	TRIM50	Q86XT4	487 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CTAGE3P	Q8IX95	158 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	PALM2	Q8IXS6	379 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	SPATA31E1	Q6ZUB1	1445 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	STAM2	O75886	525 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	FMNL1	O95466	1100 aa	Predicted RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CYP21A2	P08686	494 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	COPB1	P53618	953 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	EXOC8	Q8IYI6	725 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	LRRC47	Q8N1G4	583 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	LARP4B	Q92615	738 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	NUF2	Q9BZD4	464 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CLASP1	Q7Z460	1538 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CASQ2	O14958	399 aa	Predicted RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	PFDN6	O15212	129 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	IFNAR1	P17181	557 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	LRMP	Q12912	555 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	SEPT6	Q14141	434 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	EXOC3L4	Q17RC7	722 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	USPL1	Q5W0Q7	1092 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CDHR1	Q96JP9	859 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	BEGAIN	Q9BUH8	593 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	KLHL14	Q9P2G3	628 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	PCDHA4	Q9UN74	947 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CDC25B	P30305	580 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	USP14	P54578	494 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	PTK2	Q05397	1052 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	SCRN1	Q12765	414 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	RRAGD	Q9NQL2	400 aa	Predicted RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	AFG3L2	Q9Y4W6	797 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	ABCC12	Q96J65	1359 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	ERCC3	P19447	782 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	LMNB1	P20700	586 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	POLR2F	P61218	127 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CUL4A	Q13619	759 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	CC2D2B	Q6DHV5	1058 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	LRRC8A	Q8IWT6	810 aa		12	□□□□□ -0.49
ARID1A-204	ENST00000430799	ARHGEF2	Q92974	986 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	DHX36	Q9H2U1	1008 aa	Known RBP	12	□□□□□ -0.49
ARID1A-204	ENST00000430799	ZFYVE16	Q7Z3T8	1539 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	CCNA1	P78396	465 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	PNMA8A	Q86V59	439 aa	Predicted RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	SLFN14	P0C7P3	912 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	ADCY8	P40145	1251 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	CRKL	P46109	303 aa	Known RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	NDUFA8	P51970	172 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	IRX4	P78413	519 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.99	□□□□□ -0.49	2e-8	■■■□□ 15.5
ARID1A-204	ENST00000430799	KRT12	Q99456	494 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	RNF14	Q9UBS8	474 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	EIF3CL	B5ME19	914 aa	Known RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	MFAP3	P55082	362 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	GABPA	Q06546	454 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	PRKG1	Q13976	671 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	KRT81	Q14533	505 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	SEPT2	Q15019	361 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	ODR4	Q5SWX8	454 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	PPM1K	Q8N3J5	372 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	NT5C1B	Q96P26	610 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	EIF3C	Q99613	913 aa	Known RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	TTLL1	O95922	423 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	LIFR	P42702	1097 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	SH2D4B	Q5SQS7	431 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	TUBGCP2	Q9BSJ2	902 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	RCOR1	Q9UKL0	485 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	CCPG1	Q9ULG6	757 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	PASK	Q96RG2	1323 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	THAP12	O43422	761 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	ATP8B1	O43520	1251 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	FKBP3	Q00688	224 aa	Known RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	CCDC38	Q502W7	563 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	RASEF	Q8IZ41	740 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	NSUN7	Q8NE18	718 aa	Known RBP	11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	RABGGTA	Q92696	567 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	KAT6B	Q8WYB5	2073 aa		11.99	□□□□□ -0.49
ARID1A-204	ENST00000430799	WDR17	Q8IZU2	1322 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms