RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 SLC8A3P57103 927 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 PODNQ7Z5L7 613 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 BCCIPQ9P287 314 aaKnown RBP eCLIP12.77□□□□□ -0.36
PTCH1-208ENST00000430669 ORC4O43929 436 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.36
PTCH1-208ENST00000430669 MIER3Q7Z3K6 550 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 FAM184BQ9ULE4 1060 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.36
PTCH1-208ENST00000430669 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
PTCH1-208ENST00000430669 SUPT20HL1Q3ZLR7 823 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
PTCH1-208ENST00000430669 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 LARP4BQ92615 738 aaKnown RBP12.77□□□□□ -0.37
PTCH1-208ENST00000430669 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.37
PTCH1-208ENST00000430669 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 PXDNQ92626 1479 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 ATP5DP30049 168 aa12.77□□□□□ -0.37
PTCH1-208ENST00000430669 KRT5P13647 590 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 TNFAIP3P21580 790 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 ALCAMQ13740 583 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 CROCCP2Q86T23 111 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 IFT20Q8IY31 132 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 SLC26A4O43511 780 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 ATP2A2P16615 1042 aaKnown RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 TMTC3Q6ZXV5 915 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 RIC8AQ9NPQ8 531 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 BMP3P12645 472 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 ATP6V0A2Q9Y487 856 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 AP3B2Q13367 1082 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 TRPC3Q13507 836 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 PDIA6Q15084 440 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 MB21D2Q8IYB1 491 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 MAPK8IP1Q9UQF2 711 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 DCPSQ96C86 337 aaKnown RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 CBX1P83916 185 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 PFKFB3Q16875 520 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 CFAP221Q4G0U5 840 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 BLZF1Q9H2G9 400 aa12.76□□□□□ -0.37
PTCH1-208ENST00000430669 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
PTCH1-208ENST00000430669 PSDA5PKW4 1024 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 C10orf76Q5T2E6 689 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ANKS4BQ8N8V4 417 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ARHGEF1Q92888 912 aaKnown RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ITGB4P16144 1822 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 SYDE2Q5VT97 1194 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 GBP6Q6ZN66 633 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 MAK16Q9BXY0 300 aaKnown RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 NEDD4P46934 1319 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ACTN4O43707 911 aaKnown RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 LRCH2Q5VUJ6 765 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 GSTA5Q7RTV2 222 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 EXOC3O60645 756 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 LMAN1P49257 510 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
PTCH1-208ENST00000430669 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 MYH1P12882 1939 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 UBR2Q8IWV8 1755 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 TMEM232C9JQI7 657 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 PRKAB2O43741 272 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 MAIP1Q8WWC4 291 aa12.75□□□□□ -0.37
PTCH1-208ENST00000430669 SULF1Q8IWU6 871 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 ARMCX3Q9UH62 379 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 MYH11P35749 1972 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 BIRC3Q13489 604 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 CCDC14Q49A88 953 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 PPP1R2P3Q6NXS1 205 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 SH3RF3Q8TEJ3 882 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 FEZ2Q9UHY8 353 aaPredicted RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 CAMTA2O94983 1202 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 EEF2P13639 858 aaKnown RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 PI16Q6UXB8 463 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 DYMQ7RTS9 669 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 CPXCR1Q8N123 301 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 MMP10P09238 476 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 EVCP57679 992 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 HACE1Q8IYU2 909 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms