RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 N4BP3O15049 544 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 RGL2O15211 777 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 C6orf222P0C671 652 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 FANCCQ00597 558 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 MYL5Q02045 173 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 COG2Q14746 738 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 KARSQ15046 597 aaKnown RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 TDRD12Q587J7 1177 aaKnown RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 DEPTORQ8TB45 409 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 EFCC1Q9HA90 598 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 SERPINA10Q9UK55 444 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 DNM3Q9UQ16 869 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 UTYO14607 1347 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 CSF1RP07333 972 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 TDRD7Q8NHU6 1098 aaKnown RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 CPA4Q9UI42 421 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 MROH1Q8NDA8 1641 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 AKR1B1P15121 316 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 MNAT1P51948 309 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 KRT40Q6A162 431 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
TCOF1-204ENST00000427724 PLA2G12BQ9BX93 195 aa11.85□□□□□ -0.51
TCOF1-204ENST00000427724 MYSM1Q5VVJ2 828 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 HHIPL2Q6UWX4 724 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 CLEC10AQ8IUN9 316 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 RMDN3Q96TC7 470 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 CAMTA1Q9Y6Y1 1673 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 PDIA3P30101 505 aaKnown RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 RNASELQ05823 741 aaKnown RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 ARHGEF28Q8N1W1 1705 aaKnown RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 ENTPD3O75355 529 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 KIAA0754O94854 1291 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 ERLIN2O94905 339 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 FOSP01100 380 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-204ENST00000427724 INPP5BP32019 993 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 DNA2P51530 1060 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 NDUFA8P51970 172 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 GTF2A2P52657 109 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 MTX1Q13505 466 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 FAM160B1Q5W0V3 765 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 KANK3Q6NY19 840 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 ZSWIM5Q9P217 1185 aa11.84□□□□□ -0.51
TCOF1-204ENST00000427724 MYO9BQ13459 2157 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 LRRIQ4A6NIV6 560 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 KRT19P08727 400 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 SCG2P13521 617 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 RILPL1Q5EBL4 403 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 ADALQ6DHV7 355 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 KIAA1841Q6NSI8 718 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 SV2BQ7L1I2 683 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 ERO1BQ86YB8 467 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 ADPGKQ9BRR6 497 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 NACA2Q9H009 215 aa11.83□□□□□ -0.51
TCOF1-204ENST00000427724 CHGBP05060 677 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-204ENST00000427724 RESTQ13127 1097 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 SESTD1Q86VW0 696 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 KCNQ5Q9NR82 932 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 VPS18Q9P253 973 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 CLIC4Q9Y696 253 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-204ENST00000427724 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 BLIDQ8IZY5 108 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 RASGRP4Q8TDF6 673 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 NUDT12Q9BQG2 462 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 KBTBD13C9JR72 458 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 INO80B-WBP1J3KQ70 363 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 VPS36Q86VN1 386 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 ZBTB8OSQ8IWT0 167 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 MYCT1Q8N699 235 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 SPAG5Q96R06 1193 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 TEKT3Q9BXF9 490 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 INO80BQ9C086 356 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-204ENST00000427724 TBC1D7Q9P0N9 293 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 FZD1Q9UP38 647 aa11.83□□□□□ -0.52
TCOF1-204ENST00000427724 GLTPD2A6NH11 291 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms