RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TTI2Q6NXR4 508 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 DYMQ7RTS9 669 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 NBPF5PQ86XG9 351 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 JAKMIP2Q96AA8 810 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 FAM207AQ9NSI2 230 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
ERCC3-202ENST00000426778 BIN2Q9UBW5 565 aaPredicted RBP16.1■□□□□ 0.17
ERCC3-202ENST00000426778 EPHB6O15197 1021 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 CALML3P27482 149 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 NAPAP54920 295 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 PIP4K2BP78356 416 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 SF3B3Q15393 1217 aaKnown RBP16.09■□□□□ 0.17
ERCC3-202ENST00000426778 CABP7Q86V35 215 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 C10orf67Q8IYJ2 551 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-202ENST00000426778 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 ARPP21Q9UBL0 812 aaPredicted RBP16.09■□□□□ 0.17
ERCC3-202ENST00000426778 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
ERCC3-202ENST00000426778 TRAPPC11Q7Z392 1133 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 CCDC155Q8N6L0 562 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 SAR1BQ9Y6B6 198 aa16.09■□□□□ 0.17
ERCC3-202ENST00000426778 TXKP42681 527 aa16.08■□□□□ 0.17
ERCC3-202ENST00000426778 EIF6P56537 245 aaKnown RBP16.08■□□□□ 0.17
ERCC3-202ENST00000426778 ARL6IP4Q66PJ3 421 aaKnown RBP16.08■□□□□ 0.17
ERCC3-202ENST00000426778 CLEC10AQ8IUN9 316 aa16.08■□□□□ 0.17
ERCC3-202ENST00000426778 GLIS3Q8NEA6 775 aa16.08■□□□□ 0.17
ERCC3-202ENST00000426778 LRWD1Q9UFC0 647 aa16.08■□□□□ 0.17
ERCC3-202ENST00000426778 STXBP3O00186 592 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 C12orf60Q5U649 245 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
ERCC3-202ENST00000426778 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 EXOC1Q9NV70 894 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 ZNF263O14978 683 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 IDEP14735 1019 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 NFIXQ14938 502 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 LRRC41Q15345 812 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 HSP90B2PQ58FF3 399 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-202ENST00000426778 GIMAP8Q8ND71 665 aaPredicted RBP16.08■□□□□ 0.16
ERCC3-202ENST00000426778 HNRNPLLQ8WVV9 542 aaKnown RBP16.08■□□□□ 0.16
ERCC3-202ENST00000426778 DNAJC7Q99615 494 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 CAPN11Q9UMQ6 739 aa16.08■□□□□ 0.16
ERCC3-202ENST00000426778 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
ERCC3-202ENST00000426778 ZPR1O75312 459 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 STIM1Q13586 685 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 KBTBD4Q9NVX7 518 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 M0R2N6 131 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 TRIM14Q14142 442 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 EXOC4Q96A65 974 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 TRIM9Q9C026 710 aa16.07■□□□□ 0.16
ERCC3-202ENST00000426778 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-202ENST00000426778 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 SLC7A5Q01650 507 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
ERCC3-202ENST00000426778 TRIM34Q9BYJ4 488 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 HAUS4Q9H6D7 363 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 EIF3JO75822 258 aaKnown RBP16.06■□□□□ 0.16
ERCC3-202ENST00000426778 RHOBTB3O94955 611 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
ERCC3-202ENST00000426778 PPARDQ03181 441 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 ENOX2Q16206 610 aaKnown RBP16.06■□□□□ 0.16
ERCC3-202ENST00000426778 C2CD5Q86YS7 1000 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 KIAA0895Q8NCT3 520 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 P2RX5Q93086 422 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 PIGSQ96S52 555 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 CAPN6Q9Y6Q1 641 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 FLT1P17948 1338 aa16.06■□□□□ 0.16
ERCC3-202ENST00000426778 FAM170AA1A519 330 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 NCK2O43639 380 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 SRGNP10124 158 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 USP14P54578 494 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 GRM4Q14833 912 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 MMRN2Q9H8L6 949 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 POLD4Q9HCU8 107 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 SPATA31A1Q5TZJ5 1347 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 POTEMA6NI47 508 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 PSMD14O00487 310 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 RNF40O75150 1001 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 MOCS3O95396 460 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 EEF1GP26641 437 aaKnown RBP16.05■□□□□ 0.16
ERCC3-202ENST00000426778 DNM2P50570 870 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 APBA1Q02410 837 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 FAM98CQ17RN3 349 aaKnown RBP16.05■□□□□ 0.16
ERCC3-202ENST00000426778 MIIPQ5JXC2 388 aa16.05■□□□□ 0.16
ERCC3-202ENST00000426778 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms