RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RAG1P15918 1043 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 RILPL2Q969X0 211 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 TMEM47Q9BQJ4 181 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 OSBPL3Q9H4L5 887 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 MROH7Q68CQ1 1323 aa20.92■□□□□ 0.94
GPC1-203ENST00000425056 CTAGE5O15320 804 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 HAND2P61296 217 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 AKNAD1Q5T1N1 836 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 TTBK2Q6IQ55 1244 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 CHD1LQ86WJ1 897 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 PLEKHM2Q8IWE5 1019 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 GUCD1Q96NT3 240 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 TBX21Q9UL17 535 aa20.91■□□□□ 0.94
GPC1-203ENST00000425056 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.9■□□□□ 0.94
GPC1-203ENST00000425056 PDHBP11177 359 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 SDSP20132 328 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 SLC16A2P36021 539 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 CDK7P50613 346 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 MFAP1P55081 439 aaKnown RBP20.9■□□□□ 0.94
GPC1-203ENST00000425056 NUCB1Q02818 461 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 GNASQ5JWF2 1037 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 ZNF697Q5TEC3 545 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 SYDE2Q5VT97 1194 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 B4GALNT3Q6L9W6 998 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 TBC1D10CQ8IV04 446 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
GPC1-203ENST00000425056 GNEQ9Y223 722 aaKnown RBP20.9■□□□□ 0.94
GPC1-203ENST00000425056 A0A0C4DFX4 3053 aa20.9■□□□□ 0.94
GPC1-203ENST00000425056 FRMPD2Q68DX3 1309 aaPredicted RBP20.89■□□□□ 0.93
GPC1-203ENST00000425056 A0A0U1RQG5 324 aaPredicted RBP20.89■□□□□ 0.93
GPC1-203ENST00000425056 IGHDP01880 384 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 EPHB4P54760 987 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
GPC1-203ENST00000425056 TNFAIP2Q03169 654 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 FPGSQ05932 587 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 NSMFQ6X4W1 530 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 MFSD6Q6ZSS7 791 aa20.89■□□□□ 0.93
GPC1-203ENST00000425056 NEDD4P46934 1319 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 ARVCFO00192 962 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 SNHG28P0DPA3 235 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 TLK2Q86UE8 772 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 MORC4Q8TE76 937 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 TTC14Q96N46 770 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
GPC1-203ENST00000425056 DDX49Q9Y6V7 483 aaKnown RBP20.88■□□□□ 0.93
GPC1-203ENST00000425056 CDH23Q9H251 3354 aa20.88■□□□□ 0.93
GPC1-203ENST00000425056 TIMP1P01033 207 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 ZNF543Q08ER8 600 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 FBXO16Q8IX29 292 aaPredicted RBP20.87■□□□□ 0.93
GPC1-203ENST00000425056 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 RNPC3Q96LT9 517 aaKnown RBP20.87■□□□□ 0.93
GPC1-203ENST00000425056 VTA1Q9NP79 307 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 GPCPD1Q9NPB8 672 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 UNC80Q8N2C7 3258 aa20.87■□□□□ 0.93
GPC1-203ENST00000425056 LOC102724159A0A0B4J2E5 919 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 NFIBO00712 420 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 SMPD1P17405 629 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 NT5C2P49902 561 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 BEX3Q00994 111 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 PWP2Q15269 919 aaKnown RBP20.86■□□□□ 0.93
GPC1-203ENST00000425056 TAPT1Q6NXT6 567 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 NOL8Q76FK4 1167 aaKnown RBP20.86■□□□□ 0.93
GPC1-203ENST00000425056 EXOC6Q8TAG9 804 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 ESR2Q92731 530 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 FAM161BQ96MY7 647 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 PURBQ96QR8 312 aaKnown RBP20.86■□□□□ 0.93
GPC1-203ENST00000425056 PNMA2Q9UL42 364 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 EYSQ5T1H1 3165 aa20.86■□□□□ 0.93
GPC1-203ENST00000425056 WDR19Q8NEZ3 1342 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 CABYRO75952 493 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 ALDH5A1P51649 535 aaPredicted RBP20.85■□□□□ 0.93
GPC1-203ENST00000425056 BAATQ14032 418 aaPredicted RBP20.85■□□□□ 0.93
GPC1-203ENST00000425056 FSCN1Q16658 493 aaKnown RBP20.85■□□□□ 0.93
GPC1-203ENST00000425056 IQSEC1Q6DN90 963 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 EEPD1Q7L9B9 569 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 VTI1AQ96AJ9 217 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 PDGFCQ9NRA1 345 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 ADD3Q9UEY8 706 aaKnown RBP20.85■□□□□ 0.93
GPC1-203ENST00000425056 Q9Y3F1 56 aa20.85■□□□□ 0.93
GPC1-203ENST00000425056 ZNF213O14771 459 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 MFSD5Q6N075 450 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 CWC27Q6UX04 472 aaKnown RBP20.84■□□□□ 0.93
GPC1-203ENST00000425056 SLC43A3Q8NBI5 491 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 CLEC4DQ8WXI8 215 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 AP5M1Q9H0R1 490 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 DIAPH3Q9NSV4 1193 aa20.84■□□□□ 0.93
GPC1-203ENST00000425056 HIP1O00291 1037 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 TLR3O15455 904 aaKnown RBP20.83■□□□□ 0.93
GPC1-203ENST00000425056 CD4P01730 458 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 PTGS1P23219 599 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 GPATCH4Q5T3I0 446 aaKnown RBP20.83■□□□□ 0.93
GPC1-203ENST00000425056 CXCL17Q6UXB2 119 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 SLC30A10Q6XR72 485 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 DGKHQ86XP1 1220 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 SEMA6BQ9H3T3 888 aa20.83■□□□□ 0.93
GPC1-203ENST00000425056 TMEM265A0A087WTH1 108 aa20.82■□□□□ 0.92
GPC1-203ENST00000425056 PTPDC1A2A3K4 754 aa20.82■□□□□ 0.92
GPC1-203ENST00000425056 DYNC1LI2O43237 492 aaPredicted RBP20.82■□□□□ 0.92
GPC1-203ENST00000425056 ZKSCAN3Q9BRR0 538 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms