RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 RBM28Q9NW13 759 aaKnown RBP21.59■■□□□ 1.05
DDR1-233ENST00000421124 GOLGA8AA7E2F4 631 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 GOLGA8BA8MQT2 603 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 ZBTB5O15062 677 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 PLEKHA8P1O95397 391 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 INHAP05111 366 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 PGK2P07205 417 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 UBXN2AP68543 259 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 RTN1Q16799 776 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 USH1GQ495M9 461 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 HOMER1Q86YM7 354 aa21.58■■□□□ 1.05
DDR1-233ENST00000421124 ABCB11O95342 1321 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 LCTP09848 1927 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 DNAJC25-GNG10A0A024R161 153 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 TOB2Q14106 344 aaPredicted RBP21.57■■□□□ 1.04
DDR1-233ENST00000421124 TMTC3Q6ZXV5 915 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
DDR1-233ENST00000421124 PIGSQ96S52 555 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 AMNQ9BXJ7 453 aa21.57■■□□□ 1.04
DDR1-233ENST00000421124 A1CFQ9NQ94 594 aaKnown RBP21.57■■□□□ 1.04
DDR1-233ENST00000421124 DIS3Q9Y2L1 958 aaKnown RBP21.57■■□□□ 1.04
DDR1-233ENST00000421124 PFASO15067 1338 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 PNMA6FA0A0J9YX94 578 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 CCDC85CA6NKD9 419 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 METAP2P50579 478 aaKnown RBP eCLIP21.56■■□□□ 1.043e-6■■■■□ 25.7
DDR1-233ENST00000421124 EVCP57679 992 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 ZNF792Q3KQV3 632 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 NSMFQ6X4W1 530 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 CLEC4DQ8WXI8 215 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
DDR1-233ENST00000421124 FLRT1Q9NZU1 646 aa21.56■■□□□ 1.04
DDR1-233ENST00000421124 NFIBO00712 420 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 TRAF1Q13077 416 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 PPP2R5BQ15173 497 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 MFSD14CQ5VZR4 134 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 OLFML2BQ68BL8 750 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 CMTR1Q8N1G2 835 aaKnown RBP21.55■■□□□ 1.04
DDR1-233ENST00000421124 RRP36Q96EU6 259 aaKnown RBP21.55■■□□□ 1.04
DDR1-233ENST00000421124 MAML3Q96JK9 1138 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 C22orf23Q9BZE7 217 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 CYP39A1Q9NYL5 469 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 NID2Q14112 1375 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 MCM3APO60318 1980 aa21.55■■□□□ 1.04
DDR1-233ENST00000421124 CCDC196A0A1B0GTZ2 297 aa21.54■■□□□ 1.04
DDR1-233ENST00000421124 POTEB2H3BUK9 544 aa21.54■■□□□ 1.04
DDR1-233ENST00000421124 PPP1R11O60927 126 aaPredicted RBP21.54■■□□□ 1.04
DDR1-233ENST00000421124 MYCP01106 439 aaPredicted RBP21.54■■□□□ 1.04
DDR1-233ENST00000421124 TRIM32Q13049 653 aa21.54■■□□□ 1.04
DDR1-233ENST00000421124 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
DDR1-233ENST00000421124 ALDH8A1Q9H2A2 487 aaPredicted RBP21.54■■□□□ 1.04
DDR1-233ENST00000421124 SEC63Q9UGP8 760 aaKnown RBP21.54■■□□□ 1.04
DDR1-233ENST00000421124 MRPL11Q9Y3B7 192 aaKnown RBP21.54■■□□□ 1.04
DDR1-233ENST00000421124 CENPFP49454 3210 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 CCL5P13501 91 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 PDIA3P30101 505 aaKnown RBP21.53■■□□□ 1.04
DDR1-233ENST00000421124 CDC27P30260 824 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 MTFR1Q15390 333 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 CCDC82Q8N4S0 544 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 FAM217BQ9NTX9 383 aaPredicted RBP21.53■■□□□ 1.04
DDR1-233ENST00000421124 PCDHA1Q9Y5I3 950 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
DDR1-233ENST00000421124 PTPDC1A2A3K4 754 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 IGHA2P01877 340 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 PRKAR2AP13861 404 aaKnown RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 RBM25P49756 843 aaKnown RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 CNTN2Q02246 1040 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 CACNB2Q08289 660 aaPredicted RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 BAATQ14032 418 aaPredicted RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 ANKRD1Q15327 319 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 MAP3K21Q5TCX8 1036 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 ZNF467Q7Z7K2 595 aaPredicted RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 FAM133AQ8N9E0 248 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 RGS22Q8NE09 1264 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 ZNF274Q96GC6 653 aaPredicted RBP21.52■■□□□ 1.04
DDR1-233ENST00000421124 MAF1Q9H063 256 aa21.52■■□□□ 1.04
DDR1-233ENST00000421124 CYP2C19P33261 490 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 ADD1P35611 737 aaKnown RBP21.51■■□□□ 1.03
DDR1-233ENST00000421124 NEK4P51957 841 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 SLC30A10Q6XR72 485 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 RNF207Q6ZRF8 634 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 MCF2L2Q86YR7 1114 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 MSL3Q8N5Y2 521 aaKnown RBP21.51■■□□□ 1.03
DDR1-233ENST00000421124 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
DDR1-233ENST00000421124 TINF2Q9BSI4 451 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 TMEM106CQ9BVX2 250 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 UNC93B1Q9H1C4 597 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 HMX1Q9NP08 348 aaPredicted RBP21.51■■□□□ 1.03
DDR1-233ENST00000421124 RPTORQ8N122 1335 aa21.51■■□□□ 1.03
DDR1-233ENST00000421124 KIAA0100Q14667 2235 aaKnown RBP21.51■■□□□ 1.03
DDR1-233ENST00000421124 FUT2Q10981 343 aa21.5■■□□□ 1.03
DDR1-233ENST00000421124 FGD4Q96M96 766 aa21.5■■□□□ 1.03
DDR1-233ENST00000421124 RNF208Q9H0X6 261 aa21.5■■□□□ 1.03
DDR1-233ENST00000421124 hCG_1642624A0A1W2PR95 340 aa21.49■■□□□ 1.03
DDR1-233ENST00000421124 SOWAHBA6NEL2 793 aa21.49■■□□□ 1.03
DDR1-233ENST00000421124 CALML3P27482 149 aa21.49■■□□□ 1.03
DDR1-233ENST00000421124 AK2P54819 239 aa21.49■■□□□ 1.03
DDR1-233ENST00000421124 RPS6P62753 249 aaKnown RBP21.49■■□□□ 1.03
DDR1-233ENST00000421124 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
DDR1-233ENST00000421124 MAMDC4Q6UXC1 1216 aa21.49■■□□□ 1.03
DDR1-233ENST00000421124 BACH2Q9BYV9 841 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms