RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RGS2P41220 211 aa18.78■□□□□ 0.6
SYNGAP1-202ENST00000418600 ANKRD36BP1Q96IX9 119 aa18.78■□□□□ 0.6
SYNGAP1-202ENST00000418600 SGSM2O43147 1006 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 NSUN6Q8TEA1 469 aaKnown RBP18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 CTNND2Q9UQB3 1225 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 FDX1P10109 184 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 IFFO1Q0D2I5 559 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 YAF2Q8IY57 180 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 ISCA1Q9BUE6 129 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 UBXN1Q04323 297 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 JAKMIP2Q96AA8 810 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 FAM167AQ96KS9 214 aa18.77■□□□□ 0.6
SYNGAP1-202ENST00000418600 CYLC1P35663 651 aaPredicted RBP18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 POTEAQ6S8J7 498 aa18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 CATSPER4Q7RTX7 472 aa18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 DEFB129Q9H1M3 183 aa18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 SNX14Q9Y5W7 946 aa18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 ABCB11O95342 1321 aa18.77■□□□□ 0.59
SYNGAP1-202ENST00000418600 SLC9C1Q4G0N8 1177 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 ARMCX5Q6P1M9 558 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 GSDMBQ8TAX9 411 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 TCP11Q8WWU5 503 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 SREK1Q8WXA9 508 aaKnown RBP18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 KATNAL1Q9BW62 490 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 TBC1D2Q9BYX2 928 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 CCDC113Q9H0I3 377 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 ZMYM6O95789 1325 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 KIAA0753Q2KHM9 967 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 KRT40Q6A162 431 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 GRPEL1Q9HAV7 217 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 NELFCDQ8IXH7 590 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 FERP16591 822 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 NEDD9Q14511 834 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 GANCQ8TET4 914 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 ZNF830Q96NB3 372 aaPredicted RBP18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 HESX1Q9UBX0 185 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 PLSCR1O15162 318 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 SPATA33Q96N06 139 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 ELP1O95163 1332 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
SYNGAP1-202ENST00000418600 TNFAIP3P21580 790 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 CACTINQ8WUQ7 758 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 RMDN3Q96TC7 470 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 STX17P56962 302 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 GOLGA5Q8TBA6 731 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 TLR7Q9NYK1 1049 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 MANSC4A6NHS7 340 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 PTPN12Q05209 780 aaKnown RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 HSP90AA4PQ58FG1 418 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 A0A0D9SFI3 127 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 C6orf222P0C671 652 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 UTYO14607 1347 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 XPAP23025 273 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 HOXA13P31271 388 aaPredicted RBP18.75■□□□□ 0.59
SYNGAP1-202ENST00000418600 NDC80O14777 642 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 OR52Z1P0C646 297 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 XRCC6P12956 609 aaKnown RBP eCLIP18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 ABCD1P33897 745 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 SMC5Q8IY18 1101 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 MMP14P50281 582 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 CYP2J2P51589 502 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 DEFB115Q30KQ5 88 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 ANO1Q5XXA6 986 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 ZMYM1Q5SVZ6 1142 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 TMCO3Q6UWJ1 677 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 DSTYKQ6XUX3 929 aa18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 USP50Q70EL3 339 aaPredicted RBP18.74■□□□□ 0.59
SYNGAP1-202ENST00000418600 COG2Q14746 738 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 KMT5AQ9NQR1 393 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 SLC8A2Q9UPR5 921 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 RDH13Q8NBN7 331 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 NR2E3Q9Y5X4 410 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 RCSD1Q6JBY9 416 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 GPC2Q8N158 579 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 ANTXR1Q9H6X2 564 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 RPAP1Q9BWH6 1393 aaPredicted RBP18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 CYP2D7A0A087X1C5 515 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 KIF11P52732 1056 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 PPP2R3BQ9Y5P8 575 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 CYP4A11Q02928 519 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 FAM178BQ8IXR5 827 aa18.73■□□□□ 0.59
SYNGAP1-202ENST00000418600 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 CEP57Q86XR8 500 aa18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 THEM5Q8N1Q8 247 aa18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 MB21D1Q8N884 522 aa18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 PRPF38AQ8NAV1 312 aaKnown RBP18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 EFCC1Q9HA90 598 aa18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 ST7Q9NRC1 585 aa18.72■□□□□ 0.59
SYNGAP1-202ENST00000418600 LARSQ9P2J5 1176 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms