RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
NECAB1-201ENST00000417640 ANKRD20A3Q5VUR7 823 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 ZNF710Q8N1W2 664 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 P3H4Q92791 437 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 IRX5P78411 483 aaPredicted RBP20.51■□□□□ 0.87
NECAB1-201ENST00000417640 ITIH3Q06033 890 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 COL4A3BPQ9Y5P4 624 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 TRPM1Q7Z4N2 1603 aa20.51■□□□□ 0.87
NECAB1-201ENST00000417640 FRMPD2Q68DX3 1309 aaPredicted RBP20.51■□□□□ 0.87
NECAB1-201ENST00000417640 DPP8Q6V1X1 898 aaPredicted RBP20.51■□□□□ 0.87
NECAB1-201ENST00000417640 ZMYND10O75800 440 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 TCP10Q12799 353 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 CCDC38Q502W7 563 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
NECAB1-201ENST00000417640 I3L4J1 428 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 EXOC3L4Q17RC7 722 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 LARP4BQ92615 738 aaKnown RBP20.5■□□□□ 0.87
NECAB1-201ENST00000417640 AIFM3Q96NN9 605 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 KIF1BO60333 1816 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 N4BP1O75113 896 aaKnown RBP20.5■□□□□ 0.87
NECAB1-201ENST00000417640 PLA2G4DQ86XP0 818 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 CCDC170Q8IYT3 715 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 KIF2CQ99661 725 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 EFCAB6Q5THR3 1501 aa20.5■□□□□ 0.87
NECAB1-201ENST00000417640 MAN2A1Q16706 1144 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 PI16Q6UXB8 463 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 RNF10Q8N5U6 811 aaKnown RBP20.49■□□□□ 0.87
NECAB1-201ENST00000417640 GRK7Q8WTQ7 553 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 PLEKHG1Q9ULL1 1385 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 ZFYVE16Q7Z3T8 1539 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 USP40Q9NVE5 1235 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 PCDHB6Q9Y5E3 794 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 ZBED6P86452 979 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 NDUFA10O95299 355 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 TTC19Q6DKK2 380 aaPredicted RBP20.49■□□□□ 0.87
NECAB1-201ENST00000417640 FNBP4Q8N3X1 1017 aaPredicted RBP20.49■□□□□ 0.87
NECAB1-201ENST00000417640 STK38LQ9Y2H1 464 aa20.49■□□□□ 0.87
NECAB1-201ENST00000417640 TTC16Q8NEE8 873 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 RNF14Q9UBS8 474 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 HEXIM1O94992 359 aaKnown RBP20.48■□□□□ 0.87
NECAB1-201ENST00000417640 TERF2Q15554 542 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 CPSF2Q9P2I0 782 aaKnown RBP20.48■□□□□ 0.87
NECAB1-201ENST00000417640 H0YIN7 160 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 TRIM37O94972 964 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 TROVE2P10155 538 aaKnown RBP eCLIP20.48■□□□□ 0.87
NECAB1-201ENST00000417640 LRRC47Q8N1G4 583 aaKnown RBP20.48■□□□□ 0.87
NECAB1-201ENST00000417640 PAGE5Q96GU1 130 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 VCXQ9H320 206 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 VCX3BQ9H321 246 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 ROBO2Q9HCK4 1378 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 SHROOM2Q13796 1616 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 ARHGAP31Q2M1Z3 1444 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 CD19P15391 556 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 ADCY8P40145 1251 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 FAM178BQ8IXR5 827 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 EFCAB13Q8IY85 973 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 CCDC89Q8N998 374 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 JRKLQ9Y4A0 524 aa20.48■□□□□ 0.87
NECAB1-201ENST00000417640 CASP8Q14790 479 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 CPXCR1Q8N123 301 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 RASGRP4Q8TDF6 673 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 EPB41L5Q9HCM4 733 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 PRPF3O43395 683 aaKnown RBP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 ADAT2Q7Z6V5 191 aaKnown RBP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 KCNG1Q9UIX4 513 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 FAM170AA1A519 330 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 SLC8A1P32418 973 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 SLFNL1Q499Z3 407 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 THAP9Q9H5L6 903 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 SEMA3EO15041 775 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 NOL3O60936 208 aaKnown RBP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 SNX16P57768 344 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 GTF2IP78347 998 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 RESP18Q5W5W9 173 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 BAG6P46379 1132 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 MIER3Q7Z3K6 550 aa20.47■□□□□ 0.87
NECAB1-201ENST00000417640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.47■□□□□ 0.87
NECAB1-201ENST00000417640 TNNI1P19237 187 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 SLC8A3P57103 927 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 RAB3IPQ96QF0 476 aaPredicted RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 RIPOR2Q9Y4F9 1068 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 ATP10DQ9P241 1426 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 PRKAB2O43741 272 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 STK10O94804 968 aaKnown RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 OSBPL5Q9H0X9 879 aaPredicted RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 TYW1Q9NV66 732 aaKnown RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
NECAB1-201ENST00000417640 CCNE1P24864 410 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 RASA3Q14644 834 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 CCDC13Q8IYE1 715 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 BPIFA3Q9BQP9 254 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 ABCB6Q9NP58 842 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 FAM114A2Q9NRY5 505 aa20.46■□□□□ 0.87
NECAB1-201ENST00000417640 MFAP3LO75121 409 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms