RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 FBXO16Q8IX29 292 aaPredicted RBP12.94□□□□□ -0.34
RBFOX2-208ENST00000416721 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
RBFOX2-208ENST00000416721 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.94□□□□□ -0.347e-6■□□□□ 9.4
RBFOX2-208ENST00000416721 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
RBFOX2-208ENST00000416721 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
RBFOX2-208ENST00000416721 ZNF536O15090 1300 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 DNAJB2P25686 324 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 CALML3P27482 149 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 CCSAPQ6IQ19 270 aaPredicted RBP12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 FAM133AQ8N9E0 248 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 FGD4Q96M96 766 aa12.93□□□□□ -0.34
RBFOX2-208ENST00000416721 RLFQ13129 1914 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 LAMA2P24043 3122 aaKnown RBP12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 FGAP02671 866 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 MYL3P08590 195 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 SMPD1P17405 629 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 PDE1AP54750 535 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 CCL23P55773 120 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 PSMC6P62333 389 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 BAATQ14032 418 aaPredicted RBP12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 GRIN2CQ14957 1233 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 MCMDC2Q4G0Z9 681 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 SYDE2Q5VT97 1194 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 DCAF4Q8WV16 495 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 LNPKQ9C0E8 428 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 TRPV6Q9H1D0 765 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 HIPK3Q9H422 1215 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 HELLSQ9NRZ9 838 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 CYP39A1Q9NYL5 469 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 TBX21Q9UL17 535 aa12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
RBFOX2-208ENST00000416721 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 ICAM1P05362 532 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 PBX2P40425 430 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 CDK7P50613 346 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 ITGA7Q13683 1181 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 TMEM63BQ5T3F8 832 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 TMEM47Q9BQJ4 181 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 ZKSCAN3Q9BRR0 538 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 ZNF576Q9H609 170 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 MYH8P13535 1937 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
RBFOX2-208ENST00000416721 FRMPD3Q5JV73 1810 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 NFIBO00712 420 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 FOXP2O15409 715 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 CABYRO75952 493 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 FGBP02675 491 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 IGFBP4P22692 258 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 PDE4DQ08499 809 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 USH1GQ495M9 461 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 TMEM240Q5SV17 173 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 C16orf59Q7L2K0 433 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 OTOP2Q7RTS6 562 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 WDR11Q9BZH6 1224 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 MSRAQ9UJ68 235 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 ANAPC4Q9UJX5 808 aa12.9□□□□□ -0.34
RBFOX2-208ENST00000416721 ORC4O43929 436 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 PLA2G6O60733 806 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 CCDC85BQ15834 202 aaPredicted RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 RNF207Q6ZRF8 634 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 PPP1R13LQ8WUF5 828 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
RBFOX2-208ENST00000416721 ASTN1O14525 1302 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 CTAGE5O15320 804 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 ALX1Q15699 326 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 TAPT1Q6NXT6 567 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 CWC27Q6UX04 472 aaKnown RBP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 PBX4Q9BYU1 374 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
RBFOX2-208ENST00000416721 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms