RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 EEPD1Q7L9B9 569 aa18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 FGD4Q96M96 766 aa18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 IL23AQ9NPF7 189 aa18.42■□□□□ 0.54
SBDSP1-201ENST00000415772 FGBP02675 491 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 SNAP25P60880 206 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 CTDSPL2Q05D32 466 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 ITGA7Q13683 1181 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 ZMYM1Q5SVZ6 1142 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 IQSEC1Q6DN90 963 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 IL27Q8NEV9 243 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 SEZ6LQ9BYH1 1024 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 PBX4Q9BYU1 374 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 ADD3Q9UEY8 706 aaKnown RBP18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 A0A0C4DFX4 3053 aa18.41■□□□□ 0.54
SBDSP1-201ENST00000415772 UNC80Q8N2C7 3258 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 SOWAHBA6NEL2 793 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 GRXCR1A8MXD5 290 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 PLA2G6O60733 806 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 MX1P20591 662 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 TJAP1Q5JTD0 557 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 KIAA1211Q6ZU35 1233 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 FBXO16Q8IX29 292 aaPredicted RBP18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 SLC28A3Q9HAS3 691 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
SBDSP1-201ENST00000415772 IGFBP4P22692 258 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 PBX2P40425 430 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 RRP12Q5JTH9 1297 aaKnown RBP18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 RPUSD2Q8IZ73 545 aaKnown RBP18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 KATNBL1Q9H079 304 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 VTA1Q9NP79 307 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 GPHNQ9NQX3 736 aaPredicted RBP18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 CYP39A1Q9NYL5 469 aa18.39■□□□□ 0.53
SBDSP1-201ENST00000415772 LAMA2P24043 3122 aaKnown RBP18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 ZBBXA8MT70 800 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 CD4P01730 458 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 SMPD1P17405 629 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 CCL23P55773 120 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 BRDTQ58F21 947 aaPredicted RBP18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 MUM1L1Q5H9M0 696 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 PI4K2BQ8TCG2 481 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 DCAF4Q8WV16 495 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 MCM3APO60318 1980 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 ZNF536O15090 1300 aa18.38■□□□□ 0.53
SBDSP1-201ENST00000415772 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 CTAGE5O15320 804 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 ICAM1P05362 532 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 NKX3-2P78367 333 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 HERVK_113Q902F9 699 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 TSPYL2Q9H2G4 693 aaPredicted RBP18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 PDGFCQ9NRA1 345 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 POLR3EQ9NVU0 708 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 Q9Y3F1 56 aa18.37■□□□□ 0.53
SBDSP1-201ENST00000415772 ASTN1O14525 1302 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 NMT2O60551 498 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 SUPT20HL2P0C7V6 817 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 PSMC6P62333 389 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 RAD50Q92878 1312 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 TRPV6Q9H1D0 765 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 NKX2-4Q9H2Z4 354 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 PRDM6Q9NQX0 595 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 THEGQ9P2T0 379 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 SLC4A7Q9Y6M7 1214 aa18.36■□□□□ 0.53
SBDSP1-201ENST00000415772 B4GALT4O60513 344 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 MYL3P08590 195 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 SLC16A2P36021 539 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 CPT1AP50416 773 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 CCDC85BQ15834 202 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 FAM47CQ5HY64 1035 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 RASIP1Q5U651 963 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 SYDE2Q5VT97 1194 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 SLC43A3Q8NBI5 491 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 OTUD7AQ8TE49 926 aaPredicted RBP18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 EVI5LQ96CN4 794 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 INCENPQ9NQS7 918 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
SBDSP1-201ENST00000415772 UMODL1Q5DID0 1318 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 B4DLN1 442 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 TOP1P11387 765 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 CALML3P27482 149 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 MRPL12P52815 198 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 PDE4DQ08499 809 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 BAATQ14032 418 aaPredicted RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 AKNAD1Q5T1N1 836 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 TAPT1Q6NXT6 567 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 OR6J1Q8NGC5 347 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 ATXN2LQ8WWM7 1075 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 NOC4LQ9BVI4 516 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms