RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PPIP5K2O43314 1243 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 BBOX1O75936 387 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 UFL1O94874 794 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MYCP01106 439 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 CSF1RP07333 972 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 LDHCP07864 332 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 UBTFL1P0CB47 393 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 BMP1P13497 986 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 KLRK1P26718 216 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 EIF4A3P38919 411 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 IARSP41252 1262 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 TRAPPC10P48553 1259 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 RAB27AP51159 221 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 IFIT5Q13325 482 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 COL9A2Q14055 689 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MTERF2Q49AM1 385 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 ACBD5Q5T8D3 534 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 C20orf194Q5TEA3 1177 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 INTS3Q68E01 1043 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC174Q6PII3 467 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 RINLQ6ZS11 566 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 ITPRIPQ8IWB1 547 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 SP8Q8IXZ3 490 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 RTKN2Q8IZC4 609 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 SYNPOQ8N3V7 929 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MPNDQ8N594 471 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MYRIPQ8NFW9 859 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 ARHGAP45Q92619 1136 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 MFSD3Q96ES6 412 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 CDC5LQ99459 802 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 SRRTQ9BXP5 876 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 AS3MTQ9HBK9 375 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 PTPRHQ9HD43 1115 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 ANKIB1Q9P2G1 1089 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 POLLQ9UGP5 575 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 TAGLN3Q9UI15 199 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 KCNG1Q9UIX4 513 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 NSFL1CQ9UNZ2 370 aaKnown RBP5.38□□□□□ -1.55
SF3B1-202ENST00000409915 LTBP3Q9NS15 1303 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 SBF1O95248 1867 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 RTL9Q8NET4 1388 aa5.38□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC163A0A0D9SF12 145 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 MAGEB6P1A0A0J9YX57 407 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 ANKRD18BA2A2Z9 1011 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 BACH1O14867 736 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 TIMM44O43615 452 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 TAF5LO75529 589 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 IRS1P35568 1242 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 SOX5P35711 763 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 IGHMBP2P38935 993 aaKnown RBP5.37□□□□□ -1.55
SF3B1-202ENST00000409915 GUCY2FP51841 1108 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 EPHA4P54764 986 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 CHRNDQ07001 517 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC57Q2TAC2 916 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 RABL6Q3YEC7 729 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-202ENST00000409915 TM4SF20Q53R12 229 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 PCNX4Q63HM2 1172 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 ICE2Q659A1 982 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 SH3BP5LQ7L8J4 393 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 DZIP1LQ8IYY4 767 aaKnown RBP5.37□□□□□ -1.55
SF3B1-202ENST00000409915 TBC1D16Q8TBP0 767 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 EPS8L3Q8TE67 593 aaKnown RBP5.37□□□□□ -1.55
SF3B1-202ENST00000409915 NEUROD6Q96NK8 337 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 MPHOSPH8Q99549 860 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 RSRP1Q9BUV0 290 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 PUS3Q9BZE2 481 aaKnown RBP5.37□□□□□ -1.55
SF3B1-202ENST00000409915 CAAP1Q9H8G2 361 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 MINPP1Q9UNW1 487 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC88AQ3V6T2 1871 aa5.37□□□□□ -1.55
SF3B1-202ENST00000409915 YDJCA8MPS7 323 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 AKAP10O43572 662 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 KATNA1O75449 491 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 RAD17O75943 681 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 DDNO94850 711 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 IFIT2P09913 472 aaKnown RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 FAM163BP0C2L3 166 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 ZAP70P43403 619 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 RFX5P48382 616 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 NEK2P51955 445 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 PWP1Q13610 501 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 MORC3Q14149 939 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 LRRC24Q50LG9 513 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 TBCELQ5QJ74 424 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 CCDC81Q6ZN84 652 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 RELL1Q8IUW5 271 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 NIM1KQ8IY84 436 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 SPICE1Q8N0Z3 855 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 UBR7Q8N806 425 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 TEX19Q8NA77 164 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 CXorf38Q8TB03 319 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 ZNF296Q8WUU4 475 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 MYO19Q96H55 970 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 SHDQ96IW2 340 aa5.36□□□□□ -1.55
SF3B1-202ENST00000409915 C2orf49Q9BVC5 232 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 NOC4LQ9BVI4 516 aaKnown RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 RTFDC1Q9BY42 306 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-202ENST00000409915 ASPSCR1Q9BZE9 553 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms